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di sobolevnrm Li [104 articles]

Articoli recentemente aggiunti di sobolevnrm nella biblioteca scritti da Li. Puoi anche vedere see Li di tutti gli articoli.
  • PET/MRI Dual-Modality Tumor Imaging Using Arginine-Glycine-Aspartic (RGD)-Conjugated Radiolabeled Iron Oxide Nanoparticles
    Journal of Nuclear Medicine, Vol. 49, No. 8. (2008), pp. 1371-1379.
    by Ha Y Lee, Zibo Li, Kai Chen, Andrew R Hsu, Chenjie Xu, Jin Xie, Shouheng Sun, Xiaoyuan Chen
    posted to nanotech imaging by sobolevnrm on 2008-09-04 14:04:28 as read
  • Assessing Atomistic and Coarse-Grained Force Fields for Protein−Lipid Interactions: the Formidable Challenge of an Ionizable Side Chain in a Membrane
    Journal of Physical Chemistry B, Vol. 112, No. 32. (2008), pp. 9588-9602.
    by Igor Vorobyov, Libo Li, Toby W Allen
    posted to protein-membraneinteractions multiscale biomembranes by sobolevnrm on 2008-09-03 13:35:31 as read
  • Efficient sampling of ion motions in molecular dynamics simulations on DNA: Variant Hamiltonian replica exchange method
    Chemical Physics Letters, Vol. 454, No. 4-6. (2008)
    by Donghong Min, Hongzhi Li, Guohui Li, Bernd A Berg, Marcia O Fenley, Wei Yang
    posted to beyondmeanfield electrostatics molecularsimulation nucleicacids statisticalmechanics by sobolevnrm on 2008-08-29 13:42:09 as **
  • notes Density-functional theory for the structures and thermodynamic properties of highly asymmetric electrolyte and neutral component mixtures
    Physical Review E, Vol. 70, No. 3. (2004)
    by Z Li, J Wu
    posted to beyondmeanfield electrostatics statisticalmechanics by sobolevnrm on 2008-08-29 13:41:59 as **
  • Charged Protein Side Chain Movement in Lipid Bilayers Explored with Free Energy Simulation
    Vol. Volume 60 (2008), pp. 405-459.
    by Libo Li, Igor Vorobyov, Sudha Dorairaj, Toby W Allen, Scott E Feller
    posted to biomembranes electrostatics pka review solvation by sobolevnrm on 2008-08-28 13:07:44 as read
  • notes Very fast empirical prediction and rationalization of protein pKa values
    Proteins, Vol. 61, No. 4. (2005)
    by H Li, AD Robertson, JH Jensen
    posted to electrostatics solvation by sobolevnrm on 2008-08-23 16:23:22 as read
  • Optimal partition and effective dynamics of complex networks
    Proceedings of the National Academy of Sciences, Vol. 105, No. 23. (2008)
    by Weinan, Tiejun Li, Eric Vanden-Eijnden
    posted to clustering graphtheory kinetics by sobolevnrm on 2008-08-15 13:48:18 as read
  • Computer Simulations of Solute Exchange Using Micelles by a Collision-Driven Fusion Process
    Langmuir (in press)
    by Shuangyang Li, Xianren Zhang, Wei Dong, Wenchuan Wang
    posted to biomembranes by sobolevnrm on 2008-08-08 11:55:35 as read
  • Potential of Mean Force and pKa Profile Calculation for a Lipid Membrane-Exposed Arginine Side Chain
    Journal of Physical Chemistry B (in press)
    by Libo Li, Igor Vorobyov, Toby W Allen
    posted to biomembranes electrostatics pka solvation by sobolevnrm on 2008-08-02 17:53:53 as read
  • A windowed Fourier pseudospectral method for hyperbolic conservation laws
    Journal of Computational Physics, Vol. 214, No. 2. (20 May 2006), pp. 466-490.
    by Yuhui Sun, YC Zhou, Shu-Guang Li, GW Wei
    posted to mathematics by sobolevnrm on 2008-07-01 03:06:00 as read
  • Ensemble-Based Virtual Screening Reveals Potential Novel Antiviral Compounds for Avian Influenza Neuraminidase
    J. Med. Chem. (18 June 2008)
    by Lily S Cheng, Rommie E Amaro, Dong Xu, Wilfred W Li, Peter W Arzberger, Andrew J Mccammon
    posted to apbs electrostatics protein-ligand_interactions drugdesign by sobolevnrm on 2008-06-21 02:55:07 as read along with 1 group baker-group
  • Release of hydrophobic molecules from polymer micelles into cell membranes revealed by Forster resonance energy transfer imaging
    Proceedings of the National Academy of Sciences, Vol. 105, No. 18. (6 May 2008), pp. 6596-6601.
    by Hongtao Chen, Sungwon Kim, Li Li, Shuyi Wang, Kinam Park, Ji-Xin Cheng
    posted to biomembranes nanotech drugdesign by sobolevnrm on 2008-06-20 11:25:39 as read along with 1 group baker-group
  • Efficient sampling of ion motions in molecular dynamics simulations on DNA: Variant Hamiltonian replica exchange method
    Chemical Physics Letters, Vol. 454, No. 4-6. (20 March 2008), pp. 391-395.
    by Donghong Min, Hongzhi Li, Guohui Li, Bernd A Berg, Marcia O Fenley, Wei Yang
    posted to electrostatics molecular_simulation nucleic_acids statistical_mechanics by sobolevnrm on 2008-05-08 11:41:20 as read along with 1 group baker-group
  • Intracellular delivery of an anionic antisense oligonucleotide via receptor-mediated endocytosis
    Nucl. Acids Res. (26 March 2008), gkn115.
    by Md R Alam, Vidula Dixit, Hyunmin Kang, Zi-Bo Li, Xiaoyaun Chen, Joann Trejo, Michael Fisher, Rudy L Juliano
    posted to ccne nanotech nucleic_acids by sobolevnrm on 2008-05-08 11:18:10 as read along with 1 person and 1 group ml115 baker-group
  • CuZn Superoxide Dismutase Geometry Optimization, Energetics, and Redox Potential Calculations by Density Functional and Electrostatic Methods
    Inorg. Chem., Vol. 38, No. 5. (8 March 1999), pp. 940-950.
    by R Konecny, J Li, CL Fisher, V Dillet, D Bashford, L Noodleman
    posted to electrostatics quantum_mechanics solvation by sobolevnrm on 2008-05-05 18:03:09 as read along with 1 group baker-group
  • Dynamics of single-file water chains inside nanoscale channels: physics, biological significance and applications
    Journal of Physics D: Applied Physics, Vol. 41, No. 10. (2008), 103002.
    by Haiping Fang, Rongzheng Wan, Xiaojing Gong, Hangjun Lu, Songyan Li
    posted to nanotech solvation thrombin by sobolevnrm on 2008-04-23 11:01:51 as read along with 1 group baker-group
  • Quantum dot imaging for embryonic stem cells
    BMC Biotechnology, Vol. 7 (09 October 2007), 67.
    by Shuan Lin, Xiaoyan Xie, Manishkumar R Patel, Yao H Yang, Zongjin Li, Feng Cao, Olivier Gheysens, Yan Zhang, Sanjiv S Gambhir, Jiang H Rao, Joseph C Wu
    posted to ccne imaging nanotech by sobolevnrm on 2008-03-06 12:23:16 as read along with 2 people and 1 group SteveTheRed ml115 baker-group
  • Dual-Function Probe for PET and Near-Infrared Fluorescence Imaging of Tumor Vasculature
    J Nucl Med, Vol. 48, No. 11. (1 November 2007), pp. 1862-1870.
    by Weibo Cai, Kai Chen, Zi-Bo Li, Sanjiv S Gambhir, Xiaoyuan Chen
    posted to cancer ccne imaging nanotech by sobolevnrm on 2008-02-29 12:18:50 as read along with 1 person and 1 group ml115 baker-group
  • Metal-Coupled Folding of Cys2His2 Zinc-Finger
    J. Am. Chem. Soc., Vol. 130, No. 3. (23 January 2008), pp. 892-900.
    by W Li, J Zhang, J Wang, W Wang
    posted to metalloregulation molecular_simulation protein_folding by sobolevnrm on 2008-02-20 12:47:57 as read along with 1 group baker-group
  • Multiscale complex network of protein conformational fluctuations in single-molecule time series
    Proceedings of the National Academy of Sciences, Vol. 105, No. 2. (15 January 2008), pp. 536-541.
    by Chun-Biu Li, Haw Yang, Tamiki Komatsuzaki
    posted to experimental_methodology kinetics quasiharmonic-models_elastic-network_gnm_nma_pca_etc by sobolevnrm on 2008-02-19 12:19:19 as read along with 3 people and 1 group ruvido biehl hsekiguc baker-group
  • Electrostatic Free Energy and Its Variations in Implicit Solvent Models
    J. Phys. Chem. B (15 February 2008)
    by J Che, J Dzubiella, B Li, JA Mccammon
    posted to electrostatics solvation statistical_mechanics by sobolevnrm on 2008-02-15 12:02:44 as read along with 1 group baker-group
  • Is Arginine Charged in a Membrane?
    Biophys. J., Vol. 94, No. 2. (15 January 2008), pp. L11-13.
    by Libo Li, Igor Vorobyov, Alexander D Mackerell, Toby W Allen
    posted to biomembranes electrostatics pka solvation by sobolevnrm on 2008-01-31 12:54:26 as read along with 1 group baker-group
  • Immersed-Interface Finite-Element Methods for Elliptic Interface Problems with Nonhomogeneous Jump Conditions
    SIAM Journal on Numerical Analysis, Vol. 46, No. 1. (2008), pp. 472-495.
    by Yan Gong, Bo Li, Zhilin Li
    posted to electrostatics mathematics by sobolevnrm on 2008-01-30 18:45:50 as read along with 1 group baker-group
  • Evaluation of Configurational Entropy Methods from Peptide Folding-Unfolding Simulation
    J. Phys. Chem. B, Vol. 111, No. 49. (13 December 2007), pp. 13807-13813.
    by DW Li, M Khanlarzadeh, J Wang, S Huo, R Bruschweiler
    posted to molecular_simulation quasiharmonic-models_elastic-network_gnm_nma_pca_etc by sobolevnrm on 2008-01-22 12:59:16 as read
  • A Computational Investigation of Allostery in the Catabolite Activator Protein
    J. Am. Chem. Soc., Vol. 129, No. 50. (19 December 2007), pp. 15668-15676.
    by L Li, VN Uversky, AK Dunker, SO Meroueh
    posted to allostery electrostatics molecular_simulation solvation by sobolevnrm on 2007-12-27 12:44:54 as read along with 1 person and 1 group ruvido baker-group
  • Size dependent complexity of sequences in protein families
    The European Physical Journal B - Condensed Matter and Complex Systems, Vol. 47, No. 3. (28 October 2005), pp. 431-436.
    by J Li, J Wang, W Wang
    posted to bioinformatics structure by sobolevnrm on 2007-12-19 12:40:42 as read along with 1 group baker-group
  • A charge-driven molecular water pump
    Nature Nanotechnology, Vol. 2, No. 11. (2007), pp. 709-712.
    by Xiaojing Gong, Jingyuan Li, Hangjun Lu, Rongzheng Wan, Jichen Li, Jun Hu, Haiping Fang
    posted to molecular_simulation nanotech solvation by sobolevnrm on 2007-11-20 12:33:41 as read
  • Role of nonadditive forces on the structure and properties of liquid water
    Journal of Chemical Physics, Vol. 127 (2007), 154509.
    by J Li, Z Zhou, RJ Sadus
    posted to molecular_simulation solvation by sobolevnrm on 2007-11-20 12:18:38 as ** along with 1 group baker-group
  • Molecular dynamics simulations of ion distribution in nanochannels
    Molecular Simulation, Vol. 33, No. 12. (2007), pp. 959-963.
    by D Xu, D Li, Y Leng, Y Chen
    posted to diffusion solvation by sobolevnrm on 2007-11-01 11:27:26 as read along with 1 group baker-group
  • Algorithms and Software for Stochastic Simulation of Biochemical Reacting Systems
    Biotechnol. Prog. (26 September 2007)
    by H Li, Y Cao, LR Petzold, DT Gillespie
    posted to kinetics mathematics systems_biology by sobolevnrm on 2007-10-02 12:42:54 as read along with 1 person and 2 groups dagmar baker-group compneur
  • Application of the level-set method to the implicit solvation of nonpolar molecules
    The Journal of Chemical Physics, Vol. 127, No. 8. (2007)
    by Li T Cheng, Joachim Dzubiella, Andrew J Mccammon, Bo Li
    posted to mathematics solvation by sobolevnrm on 2007-08-27 12:02:36 as read along with 1 group baker-group
  • Observation of sequential steps in the folding of intestinal fatty acid binding protein using a slow folding mutant and 19F NMR
    Proceedings of the National Academy of Sciences of the United States of America (in press)
    by H Li, C Frieden
    posted to nmr protein_folding by sobolevnrm on 2007-07-15 22:17:37 as read along with 1 group baker-group
  • Transport of chloride and carboxyfluorescein through phospholipid vesicle membranes by heptapeptide amphiphiles
    Organic & Biomolecular Chemistry (in press)
    by R Ferdani, R Li, R Pajewski, J Pajewska, RK Winter, GW Gokel
    posted to biomembranes by sobolevnrm on 2007-07-07 23:53:48 as read along with 1 group baker-group
  • General mechanism for inchworm nanoscale track walkers: Analytical theory and realistic simulation
    Journal of Chemical Physics, Vol. 126 (2007)
    by D Li, D Fan, Z Wang
    posted to helicase kinetics by sobolevnrm on 2007-07-02 13:18:45 as read along with 1 group baker-group
  • New tricks for modelers from the crystallography toolkit: the particle mesh Ewald algorithm and its use in nucleic acid simulations
    Structure, Vol. 7, No. 3. (1999), pp. R55-R60.
    by T Darden, L Perera, L Li, L Pedersen
    posted to electrostatics molecular_dynamics by sobolevnrm on 2007-06-09 15:46:42 as read along with 1 person and 1 group trichner baker-group
  • PDB2PQR: expanding and upgrading automated preparation of biomolecular structures for molecular simulations
    Nucleic Acids Research (in press)
    by TJ Dolinsky, P Czodrowski, H Li, JE Nielsen, JH Jensen, G Klebe, NA Baker
    posted to pka software solvation by sobolevnrm on 2007-05-25 14:38:05 as read along with 1 group baker-group
  • Nonequilibrium multiscale computational model
    Journal of Chemical Physics, Vol. 126 (2007)
    by X Liu, S Li
    posted to diffusion multiscale by sobolevnrm on 2007-05-25 14:36:49 as read along with 1 group baker-group
  • Comparison of C40/82A and P27A C40/82A Barstar Mutants Using 19F NMR
    Biochemistry (in press)
    by H Li, C Frieden
    posted to nmr by sobolevnrm on 2007-05-25 14:36:49 as read along with 1 group baker-group
  • Direct Probing of Electrical Double Layers by Scanning Electrochemical Potential Microscopy
    Journal of Physical Chemistry C (in press)
    by C Hurth, C Li, AJ Bard
    posted to biomembranes electrostatics solvation by sobolevnrm on 2007-05-25 14:36:48 as read along with 1 group baker-group
  • Hydrophobic interaction and hydrogen-bond network for a methane pair in liquid water
    Proceedings of the National Academy of Sciences of the United States of America (in press)
    by JL Li, R Car, C Tang, NS Wingreen
    posted to quantum_mechanics solvation by sobolevnrm on 2007-05-25 14:36:29 as read along with 1 group baker-group
  • Assignment of polar states for protein amino acid residues using a interaction cluster decomposition algorithm and its application to high resolution protein structure modeling
    Proteins, Vol. 66, No. 4. (2007), pp. 824-37.
    by X Li, MP Jacobson, K Zhu, S Zhao, RA Friesner
    posted to electrostatics software by sobolevnrm on 2007-05-25 14:35:47 as read along with 1 group baker-group
  • Topographical complexity of multidimensional energy landscapes
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 49. (2006), pp. 18551-5.
    by GJ Rylance, RL Johnston, Y Matsunaga, CB Li, A Baba, T Komatsuzaki
    posted to protein_folding quasiharmonic-models_elastic-network_gnm_nma_pca_etc by sobolevnrm on 2007-05-25 14:35:46 as read along with 1 group baker-group
  • Density-Functional Theory for Complex Fluids
    Annual Review of Physical Chemistry (in press)
    by J Wu, Z Li
    posted to solvation statistical_mechanics by sobolevnrm on 2007-05-25 14:24:56 as read along with 1 group baker-group
  • Predicting Essential Components of Signal Transduction Networks: A Dynamic Model of Guard Cell Abscisic Acid Signaling
    PLoS Biology, Vol. 4, No. 10. (2006)
    by S Li, SM Assman, R Albert
    posted to systems_biology by sobolevnrm on 2007-05-25 14:24:56 as read along with 1 group baker-group
  • Hydration and Dewetting near Fluorinated Superhydrophobic Plates
    Journal of the American Chemical Society, Vol. 128, No. 38. (2006), pp. 12439-47.
    by X Li, J Li, M Eleftheriou, R Zhou
    posted to biomembranes nanotech by sobolevnrm on 2007-05-25 14:23:19 as read along with 1 group baker-group
  • A combined steepest descent and genetic algorithm (SD/GA) approach for the optimization of solvation parameters
    Molecular Simulation, Vol. 32, No. 6. (2006), pp. 427-35.
    by T Liu, L Ye, H Chen, J Li, Z Wu, R Zhou
    posted to electrostatics solvation by sobolevnrm on 2007-05-25 14:23:19 as read along with 1 group baker-group
  • Fluorine-19 NMR Studies on the Acid State of the Intestinal Fatty Acid Binding Protein
    Biochemistry, Vol. 45, No. 20. (2006), pp. 6272-8.
    by H Li, C Frieden
    posted to nmr protein_folding by sobolevnrm on 2007-05-25 14:23:17 as read along with 1 group baker-group
  • Fluctuation-induced forces between rough surfaces
    Physical Review Letters, Vol. 67, No. 23. (1991), pp. 3275-8.
    by H Li, M Kardar
    posted to statistical_mechanics by sobolevnrm on 2007-05-25 14:23:17 as read along with 1 group baker-group
  • Elastic Bag Model for Molecular Dynamics Simulations of Solvated Systems: Application to Liquid Water and Solvated Peptides
    Journal of Physical Chemistry B, Vol. 110, No. 26. (2006), pp. 13256-63.
    by Y Li, G Krilov, BJ Berne
    posted to solvation by sobolevnrm on 2007-05-25 14:23:17 as read along with 1 group baker-group
  • Birefringence and computational studies of a polystyrene Boger fluid in axisymmetric stagnation flow
    Journal of Non-Newtonian Fluid Mechanics, Vol. 91, No. 2-3. (2000), pp. 189-220.
    by JM Li, WR Burghardt, B Yang, B Khomami
    posted to fluid_mechanics by sobolevnrm on 2007-05-25 14:22:45 as read along with 1 group baker-group
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