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di semrich library [19 articles]

Articoli aggiunti di recente nella biblioteca di semrich .
  • A high quality draft consensus sequence of the genome of a heterozygous grapevine variety.
    PLoS ONE, Vol. 2, No. 12. (2007)
    by R Velasco, A Zharkikh, M Troggio, DA Cartwright, A Cestaro, D Pruss, M Pindo, LM Fitzgerald, S Vezzulli, J Reid, G Malacarne, D Iliev, G Coppola, B Wardell, D Micheletti, T Macalma, M Facci, JT Mitchell, M Perazzolli, G Eldredge, P Gatto, R Oyzerski, M Moretto, N Gutin, M Stefanini, Y Chen, C Segala, C Davenport, L Demattè, A Mraz, J Battilana, K Stormo, F Costa, Q Tao, A Si-Ammour, T Harkins, A Lackey, C Perbost, B Taillon, A Stella, V Solovyev, JA Fawcett, L Sterck, K Vandepoele, SM Grando, S Toppo, C Moser, J Lanchbury, R Bogden, M Skolnick, V Sgaramella, SK Bhatnagar, P Fontana, A Gutin, Y Van de Peer, F Salamini, R Viola
    posted to assembly 454 by semrich on 2008-10-01 14:33:50 as ***** along with 1 person natstreet
  • Gene-Boosted Assembly of a Novel Bacterial Genome from Very Short Reads
    PLoS Comput Biol, Vol. 4, No. 9. (2008), e1000186.
    by Steven L Salzberg, Daniel D Sommer, Daniela Puiu, Vincent T Lee
    posted to no-tag by semrich on 2008-09-26 14:35:24 as ***** along with 5 people and 4 groups druvus vaulot djkt Katje stajich Papers recommended by the Roscoff Plankton Group iSEEM microbiology_nijmegen Berkeley Mycology
  • Mauve: multiple alignment of conserved genomic sequence with rearrangements.
    Genome Res, Vol. 14, No. 7. (July 2004), pp. 1394-1403.
    by AC Darling, B Mau, FR Blattner, NT Perna
    posted to genomic comparisons by semrich on 2008-09-14 20:06:23 as ***** along with 9 people and 1 group Neeperando bcondon operon catmat AaronDarling leelarcombe azazello mariakmejia druvus gatech-compgenomics
  • DUPCAR: Reconstructing Contiguous Ancestral Regions with Duplications.
    Journal of computational biology : a journal of computational molecular cell biology (6 September 2008)
    by Jian Ma, Aakrosh Ratan, Brian J J Raney, Bernard B B Suh, Louxin Zhang, Webb Miller, David Haussler
    posted to reconstruction genome by semrich on 2008-09-14 15:27:52 as ****
  • Mapping short DNA sequencing reads and calling variants using mapping quality scores
    posted to no-tag by semrich on 2008-08-20 23:30:42 as ***** along with 1 person orzenil
  • Comparison of C. elegans and C. briggsae Genome Sequences Reveals Extensive Conservation of Chromosome Organization and Synteny
    PLoS Biology, Vol. 5, No. 7. (1 July 2007), e167.
    by Ladeana W Hillier, Raymond D Miller, Scott E Baird, Asif Chinwalla, Lucinda A Fulton, Daniel C Koboldt, Robert H Waterston
    posted to no-tag by semrich on 2008-08-19 19:01:44 as **** along with 4 people and 1 group tharris cabbagezs asddd tjmorgan C. elegans / WormBase
  • RB-Finder: An Improved Distance-Based Sliding Window Method to Detect Recombination Breakpoints.
    Journal of computational biology : a journal of computational molecular cell biology (17 August 2008)
    by Wah-Heng H Lee, Wing-Kin K Sung
    posted to no-tag by semrich on 2008-08-19 18:56:58 as ****
  • Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
    Nature (18 May 2008)
    by Brian T Wilhelm, Samuel Marguerat, Stephen Watt, Falk Schubert, Valerie Wood, Ian Goodhead, Christopher J Penkett, Jane Rogers, Jürg Bähler
    posted to analysis transcriptome by semrich on 2008-07-31 16:32:19 as **** along with 7 people and 1 group michaelbarton caseybrown myourshaw djkt jonathanjacobs GeeSharpMinor jyuh Molecular Biology
  • Discovering regulatory motifs in the Plasmodium genome using comparative genomics.
    Bioinformatics (Oxford, England) (8 July 2008)
    by Jie Wu, Douglas H H Sieglaff, Joshua Gervin, Xiaohui S S Xie
    posted to no-tag by semrich on 2008-07-13 16:44:49 as *** along with 4 people xili03 APRegier Neeperando neils
  • Consensus generation and variant detection by Celera Assembler.
    Bioinformatics (Oxford, England), Vol. 24, No. 8. (15 April 2008), pp. 1035-1040.
    by G Denisov, B Walenz, AL Halpern, J Miller, N Axelrod, S Levy, G Sutton
    posted to detection genome snp by semrich on 2008-07-05 21:50:18 as ***
  • The Airborne Metagenome in an Indoor Urban Environment
    PLoS ONE, Vol. 3, No. 4. (2 April 2008), e1862.
    by Susannah G Tringe, Tao Zhang, Xuguo Liu, Yiting Yu, Wah H Lee, Jennifer Yap, Fei Yao, Sim T Suan, Seah K Ing, Matthew Haynes, Forest Rohwer, Chia L Wei, Patrick Tan, James Bristow, Edward M Rubin, Yijun Ruan
    posted to metagenomics by semrich on 2008-06-21 23:08:34 as **** along with 1 person and 1 group djkt iSEEM
  • The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing
    Science (1 May 2008), 1158441.
    by Ugrappa Nagalakshmi, Zhong Wang, Karl Waern, Chong Shou, Debasish Raha, Mark Gerstein, Michael Snyder
    posted to analysis next-gen sequencing by semrich on 2008-06-16 17:18:14 as **** along with 16 people and 1 group waszak michaelbarton djkt urgi chad_davis stajich caseybrown gjuggler Retchless biomcgary GeeSharpMinor mapplab faion bpcusack jyuh shurjo Berkeley Mycology
  • RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
    Genome Res. (11 June 2008), gr.079558.108.
    by John Marioni, Cristopher Mason, Shrikant Mane, Matthew Stephens, Yoav Gilad
    posted to analysis expression next-gen by semrich on 2008-06-16 17:13:24 as ***** along with 16 people and 1 group dakelley caseybrown Ema balicea vega lusk vmarshal fpattyn stajich giovanni ela503 Stew jyuh kengg shurjo GustavoLacerda Berkeley Mycology
  • A Plasmodium whole-genome synteny map: indels and synteny breakpoints as foci for species-specific genes.
    PLoS pathogens, Vol. 1, No. 4. (December 2005)
    by TW Kooij, JM Carlton, SL Bidwell, N Hall, J Ramesar, CJ Janse, AP Waters
    posted to comparative plasmodium pseudochromosomes by semrich on 2008-06-16 17:03:45 as ***** along with 1 person druvus
  • Increasing the Power to Detect Causal Associations by Combining Genotypic and Expression Data in Segregating Populations
    PLoS Computational Biology, Vol. 3, No. 4. (1 April 2007), e69.
    by Jun Zhu, Matthew C Wiener, Chunsheng Zhang, Arthur Fridman, Eric Minch, Pek Y Lum, Jeffrey R Sachs, Eric E Schadt
    posted to ferdig future malaria by semrich on 2008-05-29 02:46:56 as **** along with 6 people brianb jfr hms jo_davies tmmurali beete
  • Mapping the Genetic Architecture of Gene Expression in Human Liver.
    PLoS biology, Vol. 6, No. 5. (6 May 2008)
    by Eric E E Schadt, Cliona Molony, Eugene Chudin, Ke Hao, Xia Yang, Pek Y Y Lum, Andrew Kasarskis, Bin Zhang, Susanna Wang, Christine Suver, Jun Zhu, Joshua Millstein, Solveig Sieberts, John Lamb, Debraj Guhathakurta, Jonathan Derry, John D D Storey, Iliana Avila-Campillo, Mark J J Kruger, Jason M M Johnson, Carol A A Rohl, Atila van Nas, Margarete Mehrabian, Thomas A A Drake, Aldons J J Lusis, Ryan C C Smith, F Peter P Guengerich, Stephen C C Strom, Erin Schuetz, Thomas H H Rushmore, Roger Ulrich
    posted to ferdig future malaria by semrich on 2008-05-29 02:42:28 as *** along with 9 people ddunbar caseybrown vplagnol Schmidtc ptrobajo Jonesy jyuh inesdesantiago hdopazo
  • Gene discovery and annotation using LCM-454 transcriptome sequencing.
    Genome Res, Vol. 17, No. 1. (January 2007), pp. 69-73.
    by SJ Emrich, WB Barbazuk, L Li, PS Schnable
    posted to est gen next sequencing by semrich on 2008-05-26 14:15:19 as **** along with 6 people orzenil jyuh operon plofje usagi-kirin ghattem
  • Nearly Identical Paralogs: Implications for Maize (Zea mays L.) Genome Evolution
    Genetics, Vol. 175, No. 1. (1 January 2007), pp. 429-439.
    by Scott J Emrich, Li Li, Tsui-Jung Wen, Marna D Yandeau-Nelson, Yan Fu, Ling Guo, Hui-Hsien Chou, Srinivas Aluru, Daniel A Ashlock, Patrick S Schnable
    posted to duplication evolution genome by semrich on 2008-05-26 14:11:06 as ** along with 1 person Retchless
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