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di raiyar yeast [96 articles]

Articoli aggiunti di recente alla biblioteca di raiyar classificati sotto il tag yeast. You can also see everyone's yeast.
  • Protein synthesis and assembly in mitochondrial disorders.
    Current topics in medicinal chemistry, Vol. 8, No. 15. (2008), pp. 1335-1350.
  • Transcriptional control of nonfermentative metabolism in the yeast Saccharomyces cerevisiae.
    Current genetics, Vol. 43, No. 3. (June 2003), pp. 139-160.
    by HJ Schüller
    posted to yeast review respiration regulation metabolic by raiyar on 2008-11-06 10:43:56 as *****
  • Identifying transcription factor functions and targets by phenotypic activation.
    Proc Natl Acad Sci U S A, Vol. 103, No. 32. (8 August 2006), pp. 12045-12050.
    by G Chua, QD Morris, R Sopko, MD Robinson, O Ryan, ET Chan, BJ Frey, BJ Andrews, C Boone, TR Hughes
  • Functional discovery via a compendium of expression profiles.
    Cell, Vol. 102, No. 1. (7 July 2000), pp. 109-126.
    by TR Hughes, MJ Marton, AR Jones, CJ Roberts, R Stoughton, CD Armour, HA Bennett, E Coffey, H Dai, YD He, MJ Kidd, AM King, MR Meyer, D Slade, PY Lum, SB Stepaniants, DD Shoemaker, D Gachotte, K Chakraburtty, J Simon, M Bard, SH Friend
  • Structure and function of a transcriptional network activated by the MAPK Hog1.
    Nature genetics (19 October 2008)
    by Andrew P P Capaldi, Tommy Kaplan, Ying Liu, Naomi Habib, Aviv Regev, Nir Friedman, Erin K K O'Shea
  • Hap4 is not essential for activation of respiration at low specific growth rates in Saccharomyces cerevisiae.
    The Journal of biological chemistry, Vol. 281, No. 18. (5 May 2006), pp. 12308-12314.
    posted to yeast transcription respiration regulation mitochondria metabolic by raiyar on 2008-10-04 13:11:31 as **
  • The BioGRID Interaction Database: 2008 update.
    Nucleic Acids Res, Vol. 36, No. Database issue. (January 2008)
    posted to yeast tool methodspaper interaction db by raiyar on 2008-10-02 14:31:06 as ** along with 1 person jyuh
  • A Bayesian system integrating expression data with sequence patterns for localizing proteins: comprehensive application to the yeast genome
    Journal of Molecular Biology, Vol. 301, No. 4. (25 August 2000), pp. 1059-1075.
    by Amar Drawid, Mark Gerstein
  • The role of the 3' untranslated region in mRNA sorting to the vicinity of mitochondria is conserved from yeast to human cells.
    Molecular biology of the cell, Vol. 14, No. 9. (September 2003), pp. 3848-3856.
    posted to yeast parts-list mitotarget mitochondria methodspaper localization human by raiyar on 2008-09-29 14:13:30 as **
  • A probabilistic generative model for GO enrichment analysis
    Nucl. Acids Res. (1 August 2008), gkn434.
    by Yong Lu, Roni Rosenfeld, Itamar Simon, Gerard J Nau, Ziv Bar-Joseph
  • Evolutionary rate in the protein interaction network.
    Science, Vol. 296, No. 5568. (26 April 2002), pp. 750-752.
    by HB Fraser, AE Hirsh, LM Steinmetz, C Scharfe, MW Feldman
  • Complex Genetic Interactions in a Quantitative Trait Locus.
    PLoS Genet, Vol. 2, No. 2. (3 February 2006)
    by Himanshu Sinha, Bradly P Nicholson, Lars M Steinmetz, John H Mccusker
  • Capturing cellular machines by systematic screens of protein complexes.
    Trends Microbiol, Vol. 14, No. 8. (August 2006), pp. 336-339.
    by J Gagneur, L David, LM Steinmetz
  • Antisense artifacts in transcriptome microarray experiments are resolved by actinomycin D
    Nucl. Acids Res., Vol. 35, No. 19. (8 October 2007), e128.
    by Fabiana Perocchi, Zhenyu Xu, Sandra Clauder-Munster, Lars M Steinmetz
  • High-resolution mapping of meiotic crossovers and non-crossovers in yeast
    Nature (09 July 2008)
    by Eugenio Mancera, Richard Bourgon, Alessandro Brozzi, Wolfgang Huber, Lars M Steinmetz
  • Translocation of mitochondrially synthesized Cox2 domains from the matrix to the intermembrane space.
    Molecular and cellular biology, Vol. 27, No. 13. (July 2007), pp. 4664-4673.
    by HL Fiumera, SA Broadley, TD Fox
    posted to yeast mutant mtdna mitotarget mitochondria localization im cox2 by raiyar on 2008-09-05 13:06:34 as **
  • Combining guilt-by-association and guilt-by-profiling to predict Saccharomyces cerevisiae gene function.
    Genome biology, Vol. 9 Suppl 1 (2008)
    by W Tian, LV Zhang, M Taşan, FD Gibbons, OD King, J Park, Z Wunderlich, JM Cherry, FP Roth
    posted to ym2008 yeast tool prediction network methodspaper integration genomics by raiyar on 2008-09-05 13:04:56 as ****
  • Yeast as a model for human disease.
    Current protocols in human genetics / editorial board, Jonathan L. Haines ... [et al.], Vol. Chapter 15 (February 2006)
    by MG Smith, M Snyder
    posted to yeast review model methodspaper genomics disease by raiyar on 2008-09-05 12:57:50 as **
  • Assembly of the mitochondrial membrane system: isolation of nuclear and cytoplasmic mutants of Saccharomyces cerevisiae with specific defects in mitochondrial functions.
    Journal of bacteriology, Vol. 122, No. 3. (June 1975), pp. 826-831.
    posted to basis mitochondria mutant parts-list yeast by raiyar on 2008-08-14 17:49:56 as **
  • A unique and universal molecular barcode array
    Nature Methods, Vol. 3, No. 8. (21 July 2006), pp. 601-603.
    by Sarah E Pierce, Eula L Fung, Daniel F Jaramillo, Angela M Chu, Ronald W Davis, Corey Nislow, Guri Giaever
  • The mitochondrial proteome: from inventory to function.
    Cell, Vol. 134, No. 1. (11 July 2008), pp. 22-24.
  • An integrated platform of genomic assays reveals small-molecule bioactivities
    Nat Chem Biol, Vol. 4, No. 8. (2008), pp. 498-506.
    by Shawn Hoon, Smith, Iain M Wallace, Sundari Suresh, Molly Miranda, Eula Fung, Michael Proctor, Kevan M Shokat, Chao Zhang, Ronald W Davis, Guri Giaever, Robert P St Onge, Corey Nislow
  • Systematic pathway analysis using high-resolution fitness profiling of combinatorial gene deletions
    Nature Genetics, Vol. 39, No. 2. (07 January 2007), pp. 199-206.
    by Robert P St Onge, Ramamurthy Mani, Julia Oh, Michael Proctor, Eula Fung, Ronald W Davis, Corey Nislow, Frederick P Roth, Guri Giaever
  • The Chemical Genomic Portrait of Yeast: Uncovering a Phenotype for All Genes
    Science, Vol. 320, No. 5874. (18 April 2008), pp. 362-365.
    by Maureen E Hillenmeyer, Eula Fung, Jan Wildenhain, Sarah E Pierce, Shawn Hoon, William Lee, Michael Proctor, St, Mike Tyers, Daphne Koller, Russ B Altman, Ronald W Davis, Corey Nislow, Guri Giaever
  • Folding of fumarase during mitochondrial import determines its dual targeting in yeast.
    The Journal of biological chemistry, Vol. 278, No. 46. (14 November 2003), pp. 45109-45116.
    by E Sass, S Karniely, O Pines
    posted to localization mitochondria mitotarget yeast by raiyar on 2008-04-23 14:01:44 as **
  • Global Mapping of the Yeast Genetic Interaction Network
    Science, Vol. 303, No. 5659. (06 February 2004), pp. 808-813.
    by Amy HY Tong, Guillaume Lesage, Gary D Bader, Huiming Ding, Hong Xu, Xiaofeng Xin, James Young, Gabriel F Berriz, Renee L Brost, Michael Chang, Yiqun Chen, Xin Cheng, Gordon Chua, Helena Friesen, Debra S Goldberg, Jennifer Haynes, Christine Humphries, Grace He, Shamiza Hussein, Lizhu Ke, Nevan Krogan, Zhijian Li, Joshua N Levinson, Hong Lu, Patrice Menard, Christella Munyana, Ainslie B Parsons, Owen Ryan, Raffi Tonikian, Tania Roberts, Anne-Marie Sdicu, Jesse Shapiro, Bilal Sheikh, Bernhard Suter, Sharyl L Wong, Lan V Zhang, Hongwei Zhu, Christopher G Burd, Sean Munro, Chris Sander, Jasper Rine, Jack Greenblatt, Matthias Peter, Anthony Bretscher, Graham Bell, Frederick P Roth, Grant W Brown, Brenda Andrews, Howard Bussey, Charles Boone
  • Global analysis of protein expression in yeast.
    Nature, Vol. 425, No. 6959. (16 October 2003), pp. 737-741.
    by S Ghaemmaghami, WK Huh, K Bower, RW Howson, A Belle, N Dephoure, EK O'Shea, JS Weissman
  • MPact: the MIPS protein interaction resource on yeast.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    posted to db interaction methodspaper yeast by raiyar on 2008-04-14 14:14:26 as ** along with 2 people chad_davis carlk
  • Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds.
    Gene, Vol. 156, No. 1. (14 April 1995), pp. 119-122.
    by D Mumberg, R Müller, M Funk
    posted to technique tool vector yeast by raiyar on 2008-04-10 12:34:27 as ** along with 2 people gruberjd Dualsystems
  • A yeast model of the neurogenic ataxia retinitis pigmentosa (NARP) T8993G mutation in the mitochondrial ATP synthase-6 gene.
    J Biol Chem, Vol. 282, No. 47. (23 November 2007), pp. 34039-34047.
    posted to yeast tac2 sgtcnih projmt narp mutant mtdna model mitochondria disease atp6 by raiyar on 2008-03-19 15:14:06 as **
  • Comparative assessment of large-scale data sets of protein-protein interactions.
    Nature, Vol. 417, No. 6887. (23 May 2002), pp. 399-403.
    by C von Mering, R Krause, B Snel, M Cornell, SG Oliver, S Fields, P Bork
  • MITOPRED: a web server for the prediction of mitochondrial proteins.
    Nucleic Acids Res, Vol. 32, No. Web Server issue. (1 July 2004)
    by C Guda, P Guda, E Fahy, S Subramaniam
    posted to bioinformatics human methodspaper mitochondria prediction yeast by raiyar on 2008-02-22 10:03:41 as **
  • Global analysis of protein localization in budding yeast.
    Nature, Vol. 425, No. 6959. (16 October 2003), pp. 686-691.
    by WK Huh, JV Falvo, LC Gerke, AS Carroll, RW Howson, JS Weissman, EK O'Shea
  • Global organellar proteomics
    Trends in Biotechnology, Vol. 21, No. 2. (February 2003), pp. 82-88.
    by Steven W Taylor, Eoin Fahy, Soumitra S Ghosh
  • Broad network-based predictability of S. cerevisiae gene loss-of-function phenotypes
    Genome Biology, Vol. 8, No. 12. (2007)
    by Kriston Mcgary, Insuk Lee, Edward Marcotte
  • Gene Network Inference via Structural Equation Modeling in Genetical Genomics Experiments.
    Genetics (3 February 2008)
    by Bing Liu, Alberto de la Fuente, Ina Hoeschele
  • Assembly of functional proton-translocating ATPase complex in yeast mitochondria with cytoplasmically synthesized subunit 8, a polypeptide normally encoded within the organelle.
    Proc Natl Acad Sci U S A, Vol. 85, No. 7. (April 1988), pp. 2091-2095.
    by P Nagley, LB Farrell, DP Gearing, D Nero, S Meltzer, RJ Devenish
    posted to allotopic atp8 basis mitochondria mtdna mtknockout projmt yeast by raiyar on 2008-01-28 13:48:51 as ***
  • Increasing mitochondrial substrate-level phosphorylation can rescue respiratory growth of an ATP synthase-deficient yeast.
    J Biol Chem, Vol. 280, No. 35. (2 September 2005), pp. 30751-30759.
  • Limitations to in vivo import of hydrophobic proteins into yeast mitochondria. The case of a cytoplasmically synthesized apocytochrome b.
    Eur J Biochem, Vol. 228, No. 3. (15 March 1995), pp. 762-771.
    by MG Claros, J Perea, Y Shu, FA Samatey, JL Popot, C Jacq
  • Yeast models of human mitochondrial diseases.
    IUBMB Life, Vol. 55, No. 2. (February 2003), pp. 83-95.
  • Systematic screens for human disease genes, from yeast to human and back.
    Mol Biosyst, Vol. 4, No. 1. (January 2008), pp. 18-29.
  • An improved map of conserved regulatory sites for Saccharomyces cerevisiae.
    BMC Bioinformatics, Vol. 7, No. 1. (7 March 2006)
    by Kenzie D Macisaac, Ting Wang, Benjamin D Gordon, David K Gifford, Gary D Stormo, Ernest Fraenkel
  • Allotopic expression of mitochondrial ATP synthase genes in nucleus of Saccharomyces cerevisiae.
    Methods Enzymol, Vol. 264 (1996), pp. 369-389.
    by RE Gray, RH Law, RJ Devenish, P Nagley
    posted to yeast tac2 sgtcnih projmt mtdna mitochondria example atp8 allotopic by raiyar on 2008-01-16 17:04:18 as ***
  • Bioenergetic and structural consequences of allotopic expression of subunit 8 of yeast mitochondrial ATP synthase. The hydrophobic character of residues 23 and 24 is essential for maximal activity and structural stability of the enzyme complex.
    Eur J Biochem, Vol. 261, No. 2. (April 1999), pp. 444-451.
    by X Roucou, IM Artika, RJ Devenish, P Nagley
    posted to allotopic atp8 example mitochondria mtdna projmt yeast by raiyar on 2008-01-16 17:03:00 as ***
  • The leader Peptide of yeast atp6p is required for efficient interaction with the atp9p ring of the mitochondrial ATPase.
    J Biol Chem, Vol. 282, No. 50. (14 December 2007), pp. 36167-36176.
    posted to mitochondria mutant projmt yeast by raiyar on 2008-01-15 10:32:36 as ***
  • Why do we still have a maternally inherited mitochondrial DNA? Insights from evolutionary medicine.
    Annu Rev Biochem, Vol. 76 (2007), pp. 781-821.
    by DC Wallace
  • Reactive biomolecular divergence in genetically altered yeast cells and isolated mitochondria as measured by biocavity laser spectroscopy: rapid diagnostic method for studying cellular responses to stress and disease.
    J Biomed Opt, Vol. 12, No. 5. (t 2007)
    by PL Gourley, JK Hendricks, AE McDonald, RG Copeland, MP Yaffe, RK Naviaux
    posted to mitochondria mtdna mtknockout mutant projmt yeast by raiyar on 2007-12-03 14:10:40 as **
  • Yeast cells lacking the mitochondrial gene encoding the ATP synthase subunit 6 exhibit a selective loss of complex IV and unusual mitochondrial morphology.
    J Biol Chem, Vol. 282, No. 15. (13 April 2007), pp. 10853-10864.
  • Heme Levels Switch the Function of Hap1 of Saccharomyces cerevisiae between Transcriptional Activator and Transcriptional Repressor
    Mol. Cell. Biol., Vol. 27, No. 21. (1 November 2007), pp. 7414-7424.
    by Mark J Hickman, Fred Winston
    posted to array condition hap1 mutant regulation transcription yeast by raiyar on 2007-11-14 14:49:00 as read
  • Global landscape of protein complexes in the yeast Saccharomyces cerevisiae
    Nature (22 March 2006)
    by Nevan J Krogan, Gerard Cagney, Haiyuan Yu, Gouqing Zhong, Xinghua Guo, Alexandr Ignatchenko, Joyce Li, Shuye Pu, Nira Datta, Aaron P Tikuisis, Thanuja Punna, Josã© M Peregrã­n-Alvarez, Michael Shales, Xin Zhang, Michael Davey, Mark D Robinson, Alberto Paccanaro, James E Bray, Anthony Sheung, Bryan Beattie, Dawn P Richards, Veronica Canadien, Atanas Lalev, Frank Mena, Peter Wong, Andrei Starostine, Myra M Canete, James Vlasblom, Samuel Wu, Chris Orsi, Sean R Collins, Shamanta Chandran, Robin Haw, Jennifer J Rilstone, Kiran Gandi, Natalie J Thompson, Gabe Musso, Peter St Onge, Shaun Ghanny, Mandy HY Lam, Gareth Butland, Amin M Altaf-Ul, Shigehiko Kanaya, Ali Shilatifard, Erin O'Shea, Jonathan S Weissman, James C Ingles, Timothy R Hughes, John Parkinson, Mark Gerstein, Shoshana J Wodak, Andrew Emili, Jack F Greenblatt
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