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di raiyar systems [36 articles]

Articoli aggiunti di recente alla biblioteca di raiyar classificati sotto il tag systems. You can also see everyone's systems.
  • Systematic pathway analysis using high-resolution fitness profiling of combinatorial gene deletions
    Nature Genetics, Vol. 39, No. 2. (07 January 2007), pp. 199-206.
    by Robert P St Onge, Ramamurthy Mani, Julia Oh, Michael Proctor, Eula Fung, Ronald W Davis, Corey Nislow, Frederick P Roth, Guri Giaever
    posted to analysis chemgen deletion genomics haploinsufficiency ht network pathway systems yeast by raiyar on 2008-08-11 16:05:28 as ***** along with 5 people aalibes tmmurali wnpx Ao_Li2007 gwcarter
  • The Chemical Genomic Portrait of Yeast: Uncovering a Phenotype for All Genes
    Science, Vol. 320, No. 5874. (18 April 2008), pp. 362-365.
    by Maureen E Hillenmeyer, Eula Fung, Jan Wildenhain, Sarah E Pierce, Shawn Hoon, William Lee, Michael Proctor, St, Mike Tyers, Daphne Koller, Russ B Altman, Ronald W Davis, Corey Nislow, Guri Giaever
    posted to analysis chemgen deletion genomics ht pharmacogen systems yeast by raiyar on 2008-08-11 16:02:16 as read along with 10 people and 1 group ocs emptyhb tmmurali nfreed bala lp2 roys stajich chasmand jyuh Berkeley Mycology
  • The impact of systems approaches on biological problems in drug discovery.
    Nature biotechnology, Vol. 22, No. 10. (October 2004), pp. 1215-1217.
    by L Hood, RM Perlmutter
    posted to compound disease ellstalk medicine pharmacogen review systems by raiyar on 2008-07-10 10:05:42 as read
  • Moving toward a system genetics view of disease.
    Mamm Genome (26 July 2007)
    by Solveig K Sieberts, Eric E Schadt
    posted to expression genetic network qtl review statistics systems by raiyar on 2008-06-23 15:14:34 as ** along with 4 people and 2 groups jyuh dchughes jo_davies lp2 G4ID Genetics-of-Gambling
  • Variations in DNA elucidate molecular networks that cause disease
    Nature (16 March 2008)
    by Yanqing Chen, Jun Zhu, Pek Y Lum, Xia Yang, Shirly Pinto, Douglas J Macneil, Chunsheng Zhang, John Lamb, Stephen Edwards, Solveig K Sieberts, Amy Leonardson, Lawrence W Castellini, Susanna Wang, Marie-France Champy, Bin Zhang, Valur Emilsson, Sudheer Doss, Anatole Ghazalpour, Steve Horvath, Thomas A Drake, Aldons J Lusis, Eric E Schadt
    posted to disease expression genetic human methodspaper model network qtl systems by raiyar on 2008-04-15 13:10:34 as read along with 16 people and 2 groups nicklynch semrich brianb jbsaltz djkt lp2 jo_davies shikin caseybrown ptrobajo jyuh echinotrix natstreet sanchezbuelna jfr chrisamiller 4th_floor_JC GeneGo
  • KEGG for linking genomes to life and the environment
    Nucl. Acids Res. (12 December 2007), gkm882.
    by Minoru Kanehisa, Michihiro Araki, Susumu Goto, Masahiro Hattori, Mika Hirakawa, Masumi Itoh, Toshiaki Katayama, Shuichi Kawashima, Shujiro Okuda, Toshiaki Tokimatsu, Yoshihiro Yamanishi
    posted to bioinformatics db genomics interaction metabolic methodspaper prediction systems tool by raiyar on 2008-04-11 13:29:06 as ** along with 11 people reyez namunet irenas jyuh barriot renatomilani shung hpaces massivemayhem natstreet TheresaNiederberger
  • Global systems biology, personalized medicine and molecular epidemiology
    Mol Syst Biol, Vol. 2 (3 October 2006)
    by Jeremy K Nicholson
    posted to disease interest methodspaper review systems by raiyar on 2008-03-24 16:17:49 as ** along with 1 person massivemayhem
  • STRING 7--recent developments in the integration and prediction of protein interactions.
    Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
    by C von Mering, LJ Jensen, M Kuhn, S Chaffron, T Doerks, B Krüger, B Snel, P Bork
    posted to integration interaction methodspaper proteomics systems by raiyar on 2008-02-21 19:18:48 as ** along with 12 people wenhui chad_davis jyuh kuhn balajis fisherp massivemayhem larsjuhljensen higueruelo renatomilani carlk bicko
  • Yeast models of human mitochondrial diseases.
    IUBMB Life, Vol. 55, No. 2. (February 2003), pp. 83-95.
    by A Barrientos
    posted to defect disease human methodspaper mitochondria model mutant projmt review systems yeast by raiyar on 2008-01-21 11:05:32 as ****
  • Systematic screens for human disease genes, from yeast to human and back.
    Mol Biosyst, Vol. 4, No. 1. (January 2008), pp. 18-29.
    by F Perocchi, E Mancera, LM Steinmetz
    posted to disease human integration methodspaper mitochondria rescue review systems yeast by raiyar on 2008-01-18 13:04:11 as read along with 1 person jyuh
  • Systems biology and new technologies enable predictive and preventative medicine.
    Science, Vol. 306, No. 5696. (22 October 2004), pp. 640-643.
    by L Hood, JR Heath, ME Phelps, B Lin
    posted to disease ellstalk integration methodspaper model review systems by raiyar on 2007-12-18 01:46:34 as read along with 6 people and 1 group wnpx cconboy maburkitt shikin AlexanderPico megraw GeneGo
  • The human disease network
    PNAS, Vol. 104, No. 21. (22 May 2007), pp. 8685-8690.
    by Kwang-Il Goh, Michael E Cusick, David Valle, Barton Childs, Marc Vidal, Albert-Laszlo Barabasi
    posted to analysis bioinformatics disease genomics integration methodspaper network statistics systems by raiyar on 2007-05-27 00:38:43 as read along with 24 people and 8 groups Yanno jyuh aalibes cannin kuhn jfr yas balicea neveaire bundschu grahamc joepickrell leSyl henning dejori xingxu winterschlaefer naegele shoshin shikin nolodie mingzhi carlk yaredo Biostatistics Computational-Genomics Bioinformatics Neuroscience steinmetzlab ic4 generif_paper GomezLab
  • Integrated genomic and proteomic analyses of a systematically perturbed metabolic network.
    Science, Vol. 292, No. 5518. (4 May 2001), pp. 929-934.
    by T Ideker, V Thorsson, JA Ranish, R Christmas, J Buhler, JK Eng, R Bumgarner, DR Goodlett, R Aebersold, L Hood
    posted to analysis array bioinformatics deletion expression genomics integration methodspaper model network proteomics systems yeast by raiyar on 2007-05-26 18:25:14 as ***** along with 11 people and 3 groups isimpson snuppepuppan BioGeek dragonrez bpb okarsligil opheliav wnpx gurkanbebek thomaskelder shikin Bioinformatics steinmetzlab GeneGo
  • High-throughput classification of yeast mutants for functional genomics using metabolic footprinting.
    Nat Biotechnol, Vol. 21, No. 6. (June 2003), pp. 692-696.
    by J Allen, HM Davey, D Broadhurst, JK Heald, JJ Rowland, SG Oliver, DB Kell
    posted to analysis bioinformatics defect deletion expression genomics integration metabolic_profiling systems yeast by raiyar on 2007-05-18 16:06:54 as ***** along with 3 people and 3 groups dbk irenas katerinakal streptomyces dbk-lab steinmetzlab
  • The Cinderella story of metabolic profiling: does metabolomics get to go to the functional genomics ball?
    Philos Trans R Soc Lond B Biol Sci, Vol. 361, No. 1465. (29 January 2006), pp. 147-161.
    by JL Griffin
    posted to genomics metabolic_profiling review systems by raiyar on 2007-05-14 17:04:23 as ***** along with 1 group steinmetzlab
  • Building the power house: recent advances in mitochondrial studies through proteomics and systems biology.
    Am J Physiol Cell Physiol, Vol. 292, No. 1. (January 2007)
    by TD Vo, BO Palsson
    posted to bioinformatics methodspaper mitochondria proteomics review systems by raiyar on 2007-05-14 16:54:33 as **** along with 2 people and 1 group jyuh kristen steinmetzlab
  • Reconstruction and functional characterization of the human mitochondrial metabolic network based on proteomic and biochemical data.
    J Biol Chem, Vol. 279, No. 38. (17 September 2004), pp. 39532-39540.
    by TD Vo, HJ Greenberg, BO Palsson
    posted to bioinformatics flux ht human metabolic_profiling methodspaper mitochondria systems by raiyar on 2007-05-14 14:18:48 as **** along with 1 person and 1 group kristen steinmetzlab
  • Systems biology, metabolic modelling and metabolomics in drug discovery and development
    Drug Discovery Today, Vol. 11, No. 23-24. (December 2006), pp. 1085-1092.
    by Douglas B Kell
    posted to genomics metabolic metabolic_profiling methodspaper model network prediction review systems by raiyar on 2007-05-02 12:44:16 as ** along with 10 people and 2 groups egonw irenas nicklynch alexg dullhunk mhucka fishtank shikin alanrw gemmalholliday steinmetzlab GeneGo
  • Evidence for the presence of disease-perturbed networks in prostate cancer cells by genomic and proteomic analyses: a systems approach to disease.
    Cancer Res, Vol. 65, No. 8. (15 April 2005), pp. 3081-3091.
    by B Lin, JT White, W Lu, T Xie, AG Utleg, X Yan, EC Yi, P Shannon, I Khrebtukova, PH Lange, DR Goodlett, D Zhou, TJ Vasicek, L Hood
    posted to analysis disease ellstalk example genomics ht methodspaper network systems by raiyar on 2007-04-29 11:20:26 as ** along with 1 person and 1 group megraw steinmetzlab
  • Multiple High-Throughput Analyses Monitor the Response of E. coli to Perturbations
    Science, Vol. 316, No. 5824. (27 April 2007), pp. 593-597.
    by Nobuyoshi Ishii, Kenji Nakahigashi, Tomoya Baba, Martin Robert, Tomoyoshi Soga, Akio Kanai, Takashi Hirasawa, Miki Naba, Kenta Hirai, Aminul Hoque, Pei Y Ho, Yuji Kakazu, Kaori Sugawara, Saori Igarashi, Satoshi Harada, Takeshi Masuda, Naoyuki Sugiyama, Takashi Togashi, Miki Hasegawa, Yuki Takai, Katsuyuki Yugi, Kazuharu Arakawa, Nayuta Iwata, Yoshihiro Toya, Yoichi Nakayama, Takaaki Nishioka, Kazuyuki Shimizu, Hirotada Mori, Masaru Tomita
    posted to defect flux ht metabolic_profiling mutant network systems by raiyar on 2007-04-27 13:34:19 as **** along with 4 people and 1 group jjray dylan77 ytoya IgorG steinmetzlab
  • Systems Biology Toolbox for MATLAB: a computational platform for research in systems biology
    Bioinformatics, Vol. 22, No. 4. (15 February 2006), pp. 514-515.
    by Henning Schmidt, Mats Jirstrand
    posted to bioinformatics model network systems technique by raiyar on 2007-04-26 09:40:20 as ** along with 2 people and 2 groups julius jrbanga SysbioMPI-TCells steinmetzlab
  • Bringing metabolic networks to life: integration of kinetic, metabolic, and proteomic data
    Theoretical Biology and Medical Modelling, Vol. 3 (15 December 2006), 42.
    by Wolfram Liebermeister, Edda Klipp
    posted to bioinformatics flux metabolic methodspaper model network prediction statistics systems technique by raiyar on 2007-04-23 16:54:29 as **** along with 5 people and 1 group lflorez jyuh wnpx fishtank jrbanga steinmetzlab
  • Dynamic modelling and analysis of biochemical networks: mechanism-based models and model-based experiments.
    Brief Bioinform (14 November 2006)
    by Natal A W A van Riel
    posted to bioinformatics metabolic model network prediction review systems technique by raiyar on 2007-04-23 15:48:44 as **** along with 2 people and 1 group wnpx fishtank steinmetzlab
  • Isotopomer analysis of myocardial substrate metabolism: a systems biology approach.
    Biotechnol Bioeng, Vol. 95, No. 5. (5 December 2006), pp. 972-983.
    by TD Vo, BO Palsson
    posted to bioinformatics metabolic mitochondria model respiration systems by raiyar on 2007-03-21 13:06:49 as **** along with 1 group steinmetzlab
  • Systems analysis of energy metabolism elucidates the affected respiratory chain complex in Leigh's syndrome
    Molecular Genetics and Metabolism, Vol. 91, No. 1. (May 2007), pp. 15-22.
    by Thuy D Vo, Paul, Bernhard O Palsson
    posted to bioinformatics disease metabolic methodspaper model network systems by raiyar on 2007-03-21 12:53:19 as read along with 1 group steinmetzlab
  • Global reconstruction of the human metabolic network based on genomic and bibliomic data.
    Proc Natl Acad Sci U S A (31 January 2007)
    by Natalie C C Duarte, Scott A A Becker, Neema Jamshidi, Ines Thiele, Monica L L Mo, Thuy D D Vo, Rohith Srivas, Bernhard O O Palsson
    posted to flux genomics human metabolic metabolic_profiling methodspaper mitochondria model systems by raiyar on 2007-02-06 08:42:32 as read along with 5 people and 1 group dullhunk jyuh balajis alexg noby steinmetzlab
  • Integrating high-throughput and computational data elucidates bacterial networks.
    Nature, Vol. 429, No. 6987. (6 May 2004), pp. 92-96.
    by MW Covert, EM Knight, JL Reed, MJ Herrgard, BO Palsson
    posted to ht model network regulation sgtcnih systems by raiyar on 2007-01-25 10:42:56 as ***** along with 6 people and 2 groups Retchless lfriedl RMGraze alexg JeremyZucker srp33 kdl steinmetzlab
  • Metabolic modeling of microbial strains in silico.
    Trends Biochem Sci, Vol. 26, No. 3. (March 2001), pp. 179-186.
    by MW Covert, CH Schilling, I Famili, JS Edwards, II Goryanin, E Selkov, BO Palsson
    posted to systems review network model metabolic integration flux bioinformatics by raiyar on 2007-01-24 17:05:10 as ***** along with 1 person and 2 groups icases steinmetzlab TNT
  • The proteome of Saccharomyces cerevisiae mitochondria.
    Proc Natl Acad Sci U S A, Vol. 100, No. 23. (11 November 2003), pp. 13207-13212.
    by A Sickmann, J Reinders, Y Wagner, C Joppich, R Zahedi, HE Meyer, B Schönfisch, I Perschil, A Chacinska, B Guiard, P Rehling, N Pfanner, C Meisinger
    posted to ht methodspaper mitochondria ms systems yeast by raiyar on 2007-01-22 17:43:20 as *** along with 1 group steinmetzlab
  • Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry.
    Nature, Vol. 415, No. 6868. (10 January 2002), pp. 180-183.
    by Y Ho, A Gruhler, A Heilbut, GD Bader, L Moore, SL Adams, A Millar, P Taylor, K Bennett, K Boutilier, L Yang, C Wolting, I Donaldson, S Schandorff, J Shewnarane, M Vo, J Taggart, M Goudreault, B Muskat, C Alfarano, D Dewar, Z Lin, K Michalickova, AR Willems, H Sassi, PA Nielsen, KJ Rasmussen, JR Andersen, LE Johansen, LH Hansen, H Jespersen, A Podtelejnikov, E Nielsen, J Crawford, V Poulsen, BD Sørensen, J Matthiesen, RC Hendrickson, F Gleeson, T Pawson, MF Moran, D Durocher, M Mann, CW Hogue, D Figeys, M Tyers
    posted to yeast systems ms ht by raiyar on 2007-01-22 16:48:05 as *** along with 9 people and 3 groups okarsligil bicko shivaram lfriedl chad_davis lyongu gcalda helenamistry iris_2001 kdl Bioinformatics steinmetzlab
  • Systematic identification of mitochondrial proteins by LC-MS/MS.
    Anal Chem, Vol. 74, No. 10. (15 May 2002), pp. 2400-2406.
    by D Pflieger, JP Le Caer, C Lemaire, BA Bernard, G Dujardin, J Rossier
    posted to ht methodspaper mitochondria ms systems yeast by raiyar on 2007-01-19 14:41:27 as *** along with 1 group steinmetzlab
  • Revealing Complex Traits with Small Molecules and Naturally Recombinant Yeast Strains
    Chemistry & Biology, Vol. 13, No. 3. (March 2006), pp. 319-327.
    by Ethan O Perlstein, Douglas M Ruderfer, Gopal Ramachandran, Stephen J Haggarty, Leonid Kruglyak, Stuart L Schreiber
    posted to compound systems yeast by raiyar on 2007-01-12 15:07:28 as **** along with 1 person and 1 group juokcho steinmetzlab
  • Systematic screen for human disease genes in yeast.
    Nat Genet, Vol. 31, No. 4. (August 2002), pp. 400-404.
    by LM Steinmetz, C Scharfe, AM Deutschbauer, D Mokranjac, ZS Herman, T Jones, AM Chu, G Giaever, H Prokisch, PJ Oefner, RW Davis
    posted to disease genes genomics methodspaper mitochondria respiration sgtcnih systems yeast by raiyar on 2007-01-10 09:26:34 as read along with 2 people and 1 group rebeccahainess jyuh steinmetzlab
  • Systematic identification of human mitochondrial disease genes through integrative genomics
    Nature Genetics, Vol. 38, No. 5. (02 April 2006), pp. 576-582.
    by Sarah Calvo, Mohit Jain, Xiaohui Xie, Sunil A Sheth, Betty Chang, Olga A Goldberger, Antonella Spinazzola, Massimo Zeviani, Steven A Carr, Vamsi K Mootha
    posted to systems mitochondria methodspaper integration human genomics genes disease by raiyar on 2007-01-09 21:56:49 as read along with 5 people and 1 group kentsis balicea nirfriedman ptrobajo mdstobbe steinmetzlab
  • Systems biology of SNPs
    Mol Syst Biol, Vol. 2 (4 July 2006), pp. E1-E4.
    by Neema Jamshidi, Bernhard O Palsson
    posted to human metabolic methodspaper mitochondria model snp systems by raiyar on 2007-01-08 15:09:35 as read along with 6 people and 5 groups dchughes massivemayhem cat_worth dbgrant jo_davies michaelbarton structural_bioinformatics G4ID steinmetzlab Genetics-of-Gambling BergmanLab
  • Assessing Systems Properties of Yeast Mitochondria through an Interaction Map of the Organelle
    PLoS Genetics, Vol. 2, No. 10. (20 October 2006), e170.
    by Fabiana Perocchi, Lars J Jensen, Julien Gagneur, Uwe Ahting, Christian von Mering, Peer Bork, Holger Prokisch, Lars M Steinmetz
    edited by Stuart K Kim
    posted to yeast tac2 systems sgtcnih parts-list network mitochondria methodspaper interaction integration human genes disease by raiyar on 2006-12-28 02:04:28 as read along with 1 group steinmetzlab
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