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di raiyar integration [31 articles]

Articoli aggiunti di recente alla biblioteca di raiyar classificati sotto il tag integration. You can also see everyone's integration.
  • A Bayesian system integrating expression data with sequence patterns for localizing proteins: comprehensive application to the yeast genome
    Journal of Molecular Biology, Vol. 301, No. 4. (25 August 2000), pp. 1059-1075.
    by Amar Drawid, Mark Gerstein
    posted to yeast statistics prediction parts-list methodspaper localization integration example by raiyar on 2008-10-01 13:11:47 as ** along with 1 person and 1 group lfriedl kdl
  • Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria.
    Cell, Vol. 115, No. 5. (26 November 2003), pp. 629-640.
    by VK Mootha, J Bunkenborg, JV Olsen, M Hjerrild, JR Wisniewski, E Stahl, MS Bolouri, HN Ray, S Sihag, M Kamal, N Patterson, ES Lander, M Mann
    posted to regulation proteomics network mouse mitochondria methodspaper integration expression disease by raiyar on 2008-10-01 13:09:33 as **
  • Integrating protein-protein interactions and text mining for protein function prediction
    BMC Bioinformatics, Vol. 9, No. Suppl 8. (2008)
    by Samira Jaeger, Sylvain Gaudan, Ulf Leser, Dietrich R Schuhmann
    posted to tool textmining methodspaper interaction integration genomics by raiyar on 2008-09-29 16:53:13 as ** along with 6 people farzanehs jiny bootsy reyez phoenixzxl jyuh
  • Capturing cellular machines by systematic screens of protein complexes.
    Trends Microbiol, Vol. 14, No. 8. (August 2006), pp. 336-339.
    by J Gagneur, L David, LM Steinmetz
    posted to yeast proteomics network interaction integration ht analysis by raiyar on 2008-09-05 13:33:03 as ** along with 1 person nm
  • Combining guilt-by-association and guilt-by-profiling to predict Saccharomyces cerevisiae gene function.
    Genome biology, Vol. 9 Suppl 1 (2008)
    by W Tian, LV Zhang, M Taşan, FD Gibbons, OD King, J Park, Z Wunderlich, JM Cherry, FP Roth
    posted to ym2008 yeast tool prediction network methodspaper integration genomics by raiyar on 2008-09-05 13:04:56 as ****
  • An integrated platform of genomic assays reveals small-molecule bioactivities
    Nat Chem Biol, Vol. 4, No. 8. (2008), pp. 498-506.
    by Shawn Hoon, Smith, Iain M Wallace, Sundari Suresh, Molly Miranda, Eula Fung, Michael Proctor, Kevan M Shokat, Chao Zhang, Ronald W Davis, Guri Giaever, Robert P St Onge, Corey Nislow
    posted to analysis barcode chemgen compound deletion example genomics haploinsufficiency ht integration technique yeast by raiyar on 2008-08-11 16:08:46 as ***** along with 2 people nahnah jyuh
  • A Mitochondrial Protein Compendium Elucidates Complex I Disease Biology
    Cell, Vol. 134, No. 1. (11 July 2008), pp. 112-123.
    by David J Pagliarini, Sarah E Calvo, Betty Chang, Sunil A Sheth, Scott B Vafai, Shao-En Ong, Geoffrey A Walford, Canny Sugiana, Avihu Boneh, William K Chen, David E Hill, Marc Vidal, James G Evans, David R Thorburn, Steven A Carr, Vamsi K Mootha
    posted to complex db disease genomics human integration methodspaper mitochondria mouse parts-list prediction ym2008 by raiyar on 2008-08-04 21:10:43 as ** along with 4 people brianb neils ptrobajo mdstobbe
  • Integration of HapMap-based SNP pattern analysis and gene expression profiling reveals common SNP profiles for cancer therapy outcome predictor genes.
    Cell Cycle, Vol. 5, No. 22. (November 2006), pp. 2613-2625.
    by GV Glinsky
    posted to cancer disease ellstalk expression integration snp variant by raiyar on 2008-07-11 10:05:29 as ** along with 3 people jyuh jfr macavity1g
  • The Elements of Statistical Learning
    (09 August 2001)
    by T Hastie, R Tibshirani, JH Friedman
    posted to analysis basis integration methodspaper statistics technique by raiyar on 2008-04-21 15:07:47 as ** along with 43 people and 10 groups eddymier roys akastrin robotact thefillm ansobol pdlug yaroslavvb bigga jelsas davidr gyuli garyfeng aufrank neteler leidner chad_davis jekky balajis Jaykul balicea sdvillal donade bigbossman sbarthelme bedo AbnerCYH nojhan bamberg kgajos deysandeep petrposik dbgrant nmdang alfirk brianmc jung_dalglish dquercia amirsaffari blueskies Repton quianominorleo jaonary CMU-HCII Blog_and_Wiki_Research automatic_summarization ReadingLab ur-cls ASR EvolutionaryComputation Metaheuristics Optimization CSBBGraphTheory
  • A Bayesian networks approach for predicting protein-protein interactions from genomic data.
    Science, Vol. 302, No. 5644. (17 October 2003), pp. 449-453.
    by R Jansen, H Yu, D Greenbaum, Y Kluger, NJ Krogan, S Chung, A Emili, M Snyder, JF Greenblatt, M Gerstein
    posted to genomics integration interaction methodspaper prediction by raiyar on 2008-04-11 14:11:32 as ** along with 19 people and 2 groups Robinder lfriedl balajis opheliav yuval wnpx nickluscombe ruvido massivemayhem kdang dbgrant nedwards karfunkel Evangelia shung phoenixzxl penpen926 carlk frohike kdl EBI-regulation
  • Comparative assessment of large-scale data sets of protein-protein interactions.
    Nature, Vol. 417, No. 6887. (23 May 2002), pp. 399-403.
    by C von Mering, R Krause, B Snel, M Cornell, SG Oliver, S Fields, P Bork
    posted to bioinformatics ht integration interaction methodspaper yeast by raiyar on 2008-02-22 12:21:03 as ** along with 21 people and 6 groups camster barry dragonrez bicko lfriedl chad_davis alexg j3xucite bundschu yeastyboy ruvido grahamc iris_2001 cmor shu Evangelia shikin Pao-Yang carlk cerca ethkim dbk-lab structural_bioinformatics kdl Bioinformatics generif_paper GeneGo
  • STRING 7--recent developments in the integration and prediction of protein interactions.
    Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
    by C von Mering, LJ Jensen, M Kuhn, S Chaffron, T Doerks, B Krüger, B Snel, P Bork
    posted to integration interaction methodspaper proteomics systems by raiyar on 2008-02-21 19:18:48 as ** along with 12 people wenhui chad_davis jyuh kuhn balajis fisherp massivemayhem larsjuhljensen higueruelo renatomilani carlk bicko
  • Identification of a gene causing human cytochrome c oxidase deficiency by integrative genomics.
    Proc Natl Acad Sci U S A, Vol. 100, No. 2. (21 January 2003), pp. 605-610.
    by VK Mootha, P Lepage, K Miller, J Bunkenborg, M Reich, M Hjerrild, T Delmonte, A Villeneuve, R Sladek, F Xu, GA Mitchell, C Morin, M Mann, TJ Hudson, B Robinson, JD Rioux, ES Lander
    posted to disease example integration methodspaper mitochondria by raiyar on 2008-02-20 10:20:29 as **
  • Systematic screens for human disease genes, from yeast to human and back.
    Mol Biosyst, Vol. 4, No. 1. (January 2008), pp. 18-29.
    by F Perocchi, E Mancera, LM Steinmetz
    posted to disease human integration methodspaper mitochondria rescue review systems yeast by raiyar on 2008-01-18 13:04:11 as read along with 1 person jyuh
  • MPV17 encodes an inner mitochondrial membrane protein and is mutated in infantile hepatic mitochondrial DNA depletion
    Nature Genetics, Vol. 38, No. 5. (02 April 2006), pp. 570-575.
    by Antonella Spinazzola, Carlo Viscomi, Erika Fernandez-Vizarra, Franco Carrara, Pio D'Adamo, Sarah Calvo, René M Marsano, Claudia Donnini, Hans Weiher, Pietro Strisciuglio, Rossella Parini, Emmanuelle Sarzi, Alicia Chan, Salvatore Dimauro, Agnes Rötig, Paolo Gasparini, Iliana Ferrero, Vamsi K Mootha, Valeria Tiranti, Massimo Zeviani
    posted to mtdna mitochondria methodspaper integration im human genetic example disease by raiyar on 2008-01-14 14:25:35 as ***
  • SherLoc: high-accuracy prediction of protein subcellular localization by integrating text and protein sequence data.
    Bioinformatics, Vol. 23, No. 11. (1 June 2007), pp. 1410-1417.
    by H Shatkay, A Höglund, S Brady, T Blum, P Dönnes, O Kohlbacher
    posted to bioinformatics integration localization methodspaper prediction textmining by raiyar on 2008-01-07 22:20:45 as **** along with 2 people ptrobajo mdstobbe
  • POCUS: mining genomic sequence annotation to predict disease genes
    Genome Biology, Vol. 4, No. 11. (2003)
    by Frances Turner, Daniel Clutterbuck, Colin Semple
    posted to analysis bioinformatics disease genetic genomics integration methodspaper by raiyar on 2007-12-19 21:15:38 as ****
  • Systems biology and new technologies enable predictive and preventative medicine.
    Science, Vol. 306, No. 5696. (22 October 2004), pp. 640-643.
    by L Hood, JR Heath, ME Phelps, B Lin
    posted to disease ellstalk integration methodspaper model review systems by raiyar on 2007-12-18 01:46:34 as read along with 6 people and 1 group wnpx cconboy maburkitt shikin AlexanderPico megraw GeneGo
  • Disease gene discovery through integrative genomics.
    Annu Rev Genomics Hum Genet, Vol. 6 (2005), pp. 381-406.
    by C Giallourakis, C Henson, M Reich, X Xie, VK Mootha
    posted to complex_trait disease genetic genomics integration mendelian methodspaper network by raiyar on 2007-11-16 13:10:04 as ***** along with 1 person jo_davies
  • Maximizing the potential of functional genomics.
    Nat Rev Genet, Vol. 5, No. 3. (March 2004), pp. 190-201.
    by LM Steinmetz, RW Davis
    posted to bioinformatics genomics integration methodspaper review by raiyar on 2007-09-12 21:26:03 as read along with 1 group steinmetzlab
  • The human disease network
    PNAS, Vol. 104, No. 21. (22 May 2007), pp. 8685-8690.
    by Kwang-Il Goh, Michael E Cusick, David Valle, Barton Childs, Marc Vidal, Albert-Laszlo Barabasi
    posted to analysis bioinformatics disease genomics integration methodspaper network statistics systems by raiyar on 2007-05-27 00:38:43 as read along with 24 people and 8 groups Yanno jyuh aalibes cannin kuhn jfr yas balicea neveaire bundschu grahamc joepickrell leSyl henning dejori xingxu winterschlaefer naegele shoshin shikin nolodie mingzhi carlk yaredo Biostatistics Computational-Genomics Bioinformatics Neuroscience steinmetzlab ic4 generif_paper GomezLab
  • Integrated genomic and proteomic analyses of a systematically perturbed metabolic network.
    Science, Vol. 292, No. 5518. (4 May 2001), pp. 929-934.
    by T Ideker, V Thorsson, JA Ranish, R Christmas, J Buhler, JK Eng, R Bumgarner, DR Goodlett, R Aebersold, L Hood
    posted to analysis array bioinformatics deletion expression genomics integration methodspaper model network proteomics systems yeast by raiyar on 2007-05-26 18:25:14 as ***** along with 11 people and 3 groups isimpson snuppepuppan BioGeek dragonrez bpb okarsligil opheliav wnpx gurkanbebek thomaskelder shikin Bioinformatics steinmetzlab GeneGo
  • High-throughput classification of yeast mutants for functional genomics using metabolic footprinting.
    Nat Biotechnol, Vol. 21, No. 6. (June 2003), pp. 692-696.
    by J Allen, HM Davey, D Broadhurst, JK Heald, JJ Rowland, SG Oliver, DB Kell
    posted to analysis bioinformatics defect deletion expression genomics integration metabolic_profiling systems yeast by raiyar on 2007-05-18 16:06:54 as ***** along with 3 people and 3 groups dbk irenas katerinakal streptomyces dbk-lab steinmetzlab
  • A functional genomics strategy that uses metabolome data to reveal the phenotype of silent mutations.
    Nat Biotechnol, Vol. 19, No. 1. (January 2001), pp. 45-50.
    by LM Raamsdonk, B Teusink, D Broadhurst, N Zhang, A Hayes, MC Walsh, JA Berden, KM Brindle, DB Kell, JJ Rowland, HV Westerhoff, K van Dam, SG Oliver
    posted to analysis bioinformatics defect deletion ht integration metabolic_profiling yeast by raiyar on 2007-05-18 16:05:35 as ***** along with 6 people and 3 groups czeller dbk irenas dullhunk katerinakal JeremyZucker streptomyces dbk-lab steinmetzlab
  • The need for standards, not guidelines, in biological data reporting and sharing
    Nature Biotechnology, Vol. 24, No. 11., pp. 1369-1373.
    by Lyle D Burgoon
    posted to bioinformatics integration interest review by raiyar on 2007-04-27 11:15:24 as ** along with 2 people and 1 group mhucka jfr steinmetzlab
  • Towards multidimensional genome annotation
    Nature Reviews Genetics, Vol. 7, No. 2. (February 2006), pp. 130-141.
    by Jennifer L Reed, Iman Famili, Ines Thiele, Bernhard O Palsson
    posted to genomics integration interest methodspaper by raiyar on 2007-02-21 13:05:45 as ** along with 11 people and 4 groups druvus jyuh jfr balajis eweaver dchughes cmm massivemayhem wenhan zwang lylu FAB-lab G4ID steinmetzlab Genetics-of-Gambling
  • Metabolic modeling of microbial strains in silico.
    Trends Biochem Sci, Vol. 26, No. 3. (March 2001), pp. 179-186.
    by MW Covert, CH Schilling, I Famili, JS Edwards, II Goryanin, E Selkov, BO Palsson
    posted to systems review network model metabolic integration flux bioinformatics by raiyar on 2007-01-24 17:05:10 as ***** along with 1 person and 2 groups icases steinmetzlab TNT
  • Integrative analysis of the mitochondrial proteome in yeast.
    PLoS Biol, Vol. 2, No. 6. (June 2004)
    by H Prokisch, C Scharfe, DG Camp, W Xiao, L David, C Andreoli, ME Monroe, RJ Moore, MA Gritsenko, C Kozany, KK Hixson, HM Mottaz, H Zischka, M Ueffing, ZS Herman, RW Davis, T Meitinger, PJ Oefner, RD Smith, LM Steinmetz
    posted to array deletion expression genomics integration methodspaper mitochondria ms parts-list sgtcnih yeast by raiyar on 2007-01-19 13:27:17 as read along with 1 group steinmetzlab
  • Re-analysis of data and its integration
    FEBS Letters, Vol. 579, No. 8. (21 March 2005), pp. 1802-1807.
    by Lars J Jensen, Lars M Steinmetz
    posted to analysis deletion expression genomics integration methodspaper review yeast by raiyar on 2007-01-15 14:17:58 as read along with 4 people and 1 group monocyte pcahan1 Carlton larsjuhljensen steinmetzlab
  • Systematic identification of human mitochondrial disease genes through integrative genomics
    Nature Genetics, Vol. 38, No. 5. (02 April 2006), pp. 576-582.
    by Sarah Calvo, Mohit Jain, Xiaohui Xie, Sunil A Sheth, Betty Chang, Olga A Goldberger, Antonella Spinazzola, Massimo Zeviani, Steven A Carr, Vamsi K Mootha
    posted to systems mitochondria methodspaper integration human genomics genes disease by raiyar on 2007-01-09 21:56:49 as read along with 5 people and 1 group kentsis balicea nirfriedman ptrobajo mdstobbe steinmetzlab
  • Assessing Systems Properties of Yeast Mitochondria through an Interaction Map of the Organelle
    PLoS Genetics, Vol. 2, No. 10. (20 October 2006), e170.
    by Fabiana Perocchi, Lars J Jensen, Julien Gagneur, Uwe Ahting, Christian von Mering, Peer Bork, Holger Prokisch, Lars M Steinmetz
    edited by Stuart K Kim
    posted to yeast tac2 systems sgtcnih parts-list network mitochondria methodspaper interaction integration human genes disease by raiyar on 2006-12-28 02:04:28 as read along with 1 group steinmetzlab
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