di neils Bafna [3 articles]

neils's tags

14-3-3 145-trisphosphate 16s 23andme 454 90-kda abl abscisic accessibility activation activity adaptation adaptor adenosine aeromonas aethiops affinity agents agriculture akap algorithm alignment allele allosteric alphabet alphaproteobacteria amino-acid amp-dependent amphioxus amt amyloid analysis anchor ancient animal annotation anoxybacillus antarctic anthropology antibiotic antibody antigen antimicrobial antineoplastic antitoxin apis apoptosis arabidopsis archaea arginine array article-nar article-pka-pkg article-predikin artificial arxiv as aspergillus assembly atpase aurora-a australia autism autodock autographa automated avexis avian bacillus bacteria balb barophile base basic-leucine bayes bee behaviour benchmark beta-adrenergic beta-barrel beta-propeller bibliography bibtex-import binary binding biochemical bioenergetics biofilm biogenesis bioinformatics biological biology biomarker biomass biome biomechanics biophysics bird bos-taurus brain brenda browser business c-552 c57bl ca2-calmodulin caenorhabditis calcium calcium-calmodulin-dependent calculation camp cancer candidate carbohydrate cardiac career carrier casein casp caspase cassette catalysis catalytic cattle cd3 cdc2 cdk cell centrality centrosome cercopithecus cerevisiae cftr cgmp chain channel chaperone charge checkpoint chemical chimera chip chlamydia chlorides chordate chromatography chromosome cid circular citations c-jun class-i classification cleavage clic clinical clock cloning cluster clustering cm552 cms cns codon coevolution cold collaboration colwellia commentary community comparative complementary complex complex-i complexity composition compounds computational computational-biology computer computer-assisted conference conformation consensus conservation contact context control controlled co-occurrence correlation correspondence cos covariance cow cran crispr crops cryo-em crystallography culture cultured cupriavidus curation curve cyanobacteria cycle cyclic cyclin cyclin-dependent cysteine cytochrome cytoplasmic cytoskeletal cytosol dal5 damage data database data-mining dataset decision-tree defence degradation denitrification densitometry dependent depression design development dft dgs dhfr dichroism differential differentiation diffraction dimerization dinosaur dipz discovery discrimination disease disorder distribution disulphide diversity dna dna-binding docking dog domain domestic drosophila drug duct duplication dus dynamics ecoli ecology editorial electron electron-microscopy electrophysiology electrostatics elegans elements embryo encephalitozoon endocytosis endoplasmic energy entamoeba enterococcus environment environmental envz enyzme enzyme enzymology epidermal epithelial epr epulopiscium errors erythrocyte est eucalyptus eukarya eukaryotic evaluation evolution exiguobacterium expression extracellular extremophile factor-2 factors fairy-wren family fda feature feedback female fgfr fibroblast fish fkbp flavour flippase fluid fold folding foldx food force-field for-thuber fossil fractions fragments framework function fungi fusion gecko gemmata gene genetics genome genomics geochemistry glam2 global glucose glucosidase glutathione glycogen glycomics glycosylation gmod gmp gmp-dependent godwit gos gpi g-protein g-protein-coupled graph graphics greasemonkey grm growth h5n1 haem haemagglutinin haloferax halophile heat-shock helicobacter helix hepatocyte hgt high-throughput histidine-kinase histone history hiv hmm hominoid homology horizontal hotdog hpc hsp70 human humour hupo hybridization hypertension hyperthermophily hypothesis icat ignicoccus ignobel illumina imac image images immobilisation immunoblotting immunology immunoprecipitation impact-factor import importin in inbred influenza information infrastructure inhibitor initiation injury inositol in-situ insulin integration integrin intelligence interaction interactome interface intermediate internet interpretation intestinal intestine intracellular introns ion-channel ionophores iron irs isoenzymes isoform isoforms isolation iubmb javascript jnk journals kernel kidney kinase kinetics kinome knockout knowledgebase koryarchaeota koryarchaeum laccaria lake-vostok languages lc-ms lead leishmania leptospira leucine library lichen lie ligand ligand-gated ligases limosa lims line linear lipid liquid literature localisation lod loop lrr lsid lymphocyte m2 machine-learning macrophage magnesium magnetic malaria male management manganese map mapk mapping marine mark markov mass-spec mathematics matrix maturation md mechanism medicine medline membrane mesophily metabolism metabolomics metadata metagenomics metal metalloprotein meta-prediction methanococcoides methanococcus methanogen methanogenium methanosarcinaceae methods mhc mice microarray microbial microbio microbiology microdomains microfilament microscopy migration mites mitochondria mitogen-activated mitogens mobile modelling models modification module molecular monoclonal monophosphate motif motifs motion mouse mpsk1 ms-ms multiprotein muscle mutagenesis mutation mycobacterium mycorrhizae myocytes myod myxobacteria names nanoarcheum natronomonas nb-arc ncrna neandertal neanderthal negative neighbourhood neisseria nematode neoplasms nerve netphorest netphosk network neural neural-network neurochemistry next-generation nir nirs nirx nitric nitrite nitrosomonas nitrous nls nmr nnr nomenclature nosx npc nsrr nuclear nucleation nucleolus nucleoporin nucleotide nucleus nucpred nup of ogt oligomeric oncogene online ontology openaccess opensource operon opinion opsin optimisation orf orfan orfs organ organisation organophosphorus orthology oryza osmotic oxide p110 p21-activated p38 p56lck p85 pagerank palaeontology panther papaya par1 paracoccus parallel parasitism patch-clamp pathogen pathway pathways pattern pb2 pca pdb pdbml pdz peptidase peptide peptidoglycan periodicity perl permafrost peroxidase personalised pfam phenylobacterium phosphatase phosphoinositide phosphopeptides phosphoprotein phosphorus phosphorylation phosphotransferase phylogeny physiology pi3k pichia pilbara pilus pipeline pkn1 pks plagiarism planctomycete plant plasmodium plastid platypus polo polyketide polymerase polyploidy population porin post-translational potassium potential practice prebiotic precipitin prediction predikin pressure probability processing profile programming prokaryote prokaryotic promoter propensity proposal prosite protease protein protein-dna protein-ligand protein-protein protein-serine-threonine protein-tyrosine protein-tyrosine-phosphatase proteome proteomics protocol proto-oncogene prozac pseudoalteromonas pseudogene pseudomonas psi psi-blast pssm psychology psychromonas psychrophily ptm publication pubmed purification pwm pyrobaculum pyrococcus pyrosequencing python qc quality quantitation quaternary radioisotope ran raptor rast rat ray reaction rearrangement receptor recognition recombinant recommendation reconstruction recruitment redox reductase refinement refseq region regulation regulator relationship repair repeat reperfusion repetitive replication report repository repressor reproducibility research residue resistance resolution resonance respiratory response results reticulum retinoblastoma retrieval review rhizobia rhodopsin rhodothermus ribonuclease ribosomal ribosome rice rigid-body rio rna rnai rnasep roc rosetta s6 saccharomyces saccharomycetales salivary salmon sars sativa scent schema sciences scl score scoring screen screening scrubwren search sec secondary secretion selection selenocysteine semantic sensing sensitivity sequence sequencing serine serine-protease serpin service sh2 sh3 sharing shewanella signal signaling signature silac silica similarity simulation single-molecule site-directed sites situ small smooth snake snp sodium software solexa solubility song sorting specific specificity spectroscopy spirochaete splicing squid src srp standards staphylococcus statistics storage strategy streptomyces structural structural-genomics structure structure-activity stucture subcellular subset substrate subunit sulfolobus sulfur superfamily suppressor surface survey svm symbiosis synteny synthase synthesis system systems-biology tag target targeting taxonomy t-cell teaching techniques temperature tertiary tests tet text-mining theorem theoretical thermal thermophily thermus thioesterase threonine tissue t-lymphocyte tobacco tomography tools topic topology toxin trans-activators transcript transcription transcriptomics transducing transduction transfection transfer transferase transgenic translation translocation transport transporter treponema trials trichostrongylus triphosphate trna tumor tunicamycin two-component type type-iii tyrosine ubiquitin ubiquitin-protein ultraviolet uptake uq usage user-computer validation variome vasoactive vasodilator venom vertebrate viking virtual virulence virus visualisation vocabulary voltage-gated water web20 webserver wiki workplace wortmannin wwpdb xanthomonas xenopus xml x-ray yeast zebrafinch