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di jfr ffpe [32 articles]

Articoli aggiunti di recente alla biblioteca di jfr classificati sotto il tag ffpe. You can also see everyone's ffpe.
  • Tissues from routine pathology archives are suitable for microRNA analyses by quantitative PCR.
    Journal of clinical pathology (28 August 2008)
    by Udo Siebolts, Heike Varnholt, Uta Drebber, Hans-Peter P Dienes, Claudia Wickenhauser, Margarete Odenthal
    posted to technology rt-pcr mirna ffpe by jfr on 2008-10-30 16:34:55 as * along with 1 person jsnowdon
  • RNA expression analysis from formalin fixed paraffin embedded tissues.
    Histochemistry and cell biology (5 August 2008)
    by Susan M Farragher, Austin Tanney, Richard D Kennedy, D Paul Harkin
    posted to microarray_technology ffpe by jfr on 2008-10-13 17:08:56 as * along with 1 person jyuh
  • Improved RNA quality and TaqMan(R) Pre-amplification method (PreAmp) to enhance expression analysis from formalin fixed paraffin embedded (FFPE) materials
    BMC Biotechnology, Vol. 8 (06 February 2008), 10.
    by Jinghuan Li, Paul Smyth, Susanne Cahill, Karen Denning, Richard Flavin, Sinead Aherne, Marco Pirotta, Simone M Guenther, John J O'Leary, Orla Sheils
    posted to rt-pcr protocol ffpe by jfr on 2008-09-24 13:25:28 as ** along with 1 person jyuh
  • A cut-off based approach for gene expression analysis of formalin-fixed and paraffin-embedded tissue samples.
    Genomics, Vol. 91, No. 6. (June 2008), pp. 522-529.
    by PK Srivastava, S Küffer, B Brors, P Shahi, L Li, M Kenzelmann, N Gretz, HJ Gröne
    posted to ffpe by jfr on 2008-09-05 14:05:00 as ** along with 1 person jyuh
  • Expression profiling with RNA from formalin-fixed, paraffin-embedded material.
    BMC medical genomics, Vol. 1 (2008)
    posted to ffpe microarray_technology by jfr on 2008-06-17 17:51:33 as ** along with 1 person jyuh
  • Acquisition of biologically relevant gene expression data by Affymetrix microarray analysis of archival formalin-fixed paraffin-embedded tumours
    British Journal of Cancer, Vol. aop, No. current. (01 April 2008)
    by KM Linton, Y Hey, E Saunders, M Jeziorska, J Denton, CL Wilson, R Swindell, S Dibben, CJ Miller, SD Pepper, JA Radford, AJ Freemont
    posted to affy ffpe by jfr on 2008-05-21 13:24:50 as ** along with 1 person kmegq
  • Quantitative expression profiling of highly degraded RNA from formalin-fixed, paraffin-embedded breast tumor biopsies by oligonucleotide microarrays
    Laboratory Investigation, Vol. aop, No. current.
    by Maria Ravo, Margherita Mutarelli, Lorenzo Ferraro, Olì, Ornella Paris, Roberta Tarallo, Alessandra Vigilante, Daniela Cimino, Michele De Bortoli, Ernesto Nola, Luigi Cicatiello, Alessandro Weisz
    posted to dasl ffpe illumina rna_quality by jfr on 2008-04-30 15:48:42 as ** along with 1 person jyuh
  • Investigating fixative-induced changes in RNA quality and utility by microarray analysis.
    Experimental and molecular pathology, Vol. 84, No. 2. (April 2008), pp. 156-172.
    by ML Cox, SM Eddy, ZS Stewart, MR Kennel, MZ Man, JD Paulauskis, RW Dunstan
    posted to ffpe protocol rna_quality by jfr on 2008-04-30 14:54:09 as *
  • Comparison of RNA amplification methods and chip platforms for microarray analysis of samples processed by laser capture microdissection.
    Journal of cellular biochemistry, Vol. 103, No. 2. (1 February 2008), pp. 556-563.
    posted to ffpe microarray_protocol by jfr on 2008-04-18 14:12:58 as ** along with 1 person jyuh
  • RNA expression analysis of formalin-fixed paraffin-embedded tumors
    Laboratory Investigation, Vol. aop, No. current.
    by Shannon K Penland, Temitope O Keku, Chad Torrice, Xiaping He, Janakiraman Krishnamurthy, Katherine A Hoadley, John T Woosley, Nancy E Thomas, Charles M Perou, Robert S Sandler, Norman E Sharpless,
    posted to ffpe microarray_technology by jfr on 2008-04-16 17:45:07 as ** along with 1 person jyuh
  • Successful application of microarray technology to microdissected formalin-fixed, paraffin-embedded tissue.
    J Mol Diagn, Vol. 9, No. 1. (February 2007), pp. 70-79.
    by RA Coudry, SI Meireles, R Stoyanova, HS Cooper, A Carpino, X Wang, PF Engstrom, ML Clapper
    posted to ffpe microarray_technology by jfr on 2008-04-16 15:17:53 as ** along with 1 person jyuh
  • Determinants of RNA Quality from FFPE Samples.
    PLoS ONE, Vol. 2, No. 12. (2007)
    posted to ffpe rna_quality sop by jfr on 2008-03-03 16:11:07 as ** along with 1 person jyuh
  • Genome-wide, high-resolution detection of copy number, loss of heterozygosity, and genotypes from formalin-fixed, paraffin-embedded tumor tissue using microarrays.
    Cancer Res, Vol. 67, No. 6. (15 March 2007), pp. 2544-2551.
    by S Jacobs, ER Thompson, Y Nannya, G Yamamoto, R Pillai, S Ogawa, DK Bailey, IG Campbell
    posted to affy ffpe snp-arrays by jfr on 2008-02-11 16:54:39 as ****
  • Reliable High-Throughput Genotyping and Loss-of-Heterozygosity Detection in Formalin-Fixed, Paraffin-Embedded Tumors Using Single Nucleotide Polymorphism Arrays
    Cancer Res, Vol. 65, No. 22. (15 November 2005), pp. 10188-10191.
    by Esther H Lips, Jan W Dierssen, Ronald van Eijk, Jan Oosting, Paul H Eilers, Rob A Tollenaar, Eelco J de Graaf, Van't, Cisca Wijmenga, Hans Morreau, Tom van Wezel
    posted to ffpe illumina snp-arrays by jfr on 2008-02-11 12:04:18 as read along with 1 person cpnP
  • Gene expression profiling from formalin-fixed paraffin-embedded tumors of pediatric glioblastoma.
    Clin Cancer Res, Vol. 13, No. 21. (1 November 2007), pp. 6284-6292.
    posted to ffpe by jfr on 2008-02-04 09:54:20 as *
  • An exfoliation and enrichment strategy results in improved transcriptional profiles when compared to matched formalin fixed samples.
    BMC Clinical Pathology, Vol. 7 (03 August 2007), 7.
    by Wilfrido D Mojica, Leighton Stein, Lesleyann Hawthorn
    posted to ffpe microarray_protocol by jfr on 2007-12-04 16:53:12 as * along with 1 person jyuh
  • Molecular restoration of archived transcriptional profiles by complementary-template reverse-transcription (CT-RT).
    Nucleic Acids Res (17 July 2007)
    by Olivier Loudig, Ekaterina Milova, Margaret Brandwein-Gensler, Aldo Massimi, Thomas J J Belbin, Geoffrey Childs, Robert H H Singer, Thomas Rohan, Michael B B Prystowsky
    posted to ffpe microarray_protocol by jfr on 2007-12-03 17:34:46 as * along with 1 person jyuh
  • The isolation of nucleic acids from fixed, paraffin-embedded tissues-which methods are useful when?
    PLoS ONE, Vol. 2 (2007)
    by MT Gilbert, T Haselkorn, M Bunce, JJ Sanchez, SB Lucas, LD Jewell, EV Marck, M Worobey
    posted to ffpe rt-pcr by jfr on 2007-08-02 13:38:42 as * along with 1 person jyuh
  • Global gene expression profiling of formalin-fixed paraffin-embedded tumor samples: a comparison to snap-frozen material using oligonucleotide microarrays.
    Virchows Arch, Vol. 450, No. 6. (June 2007), pp. 699-711.
    posted to ffpe microarray_technology by jfr on 2007-07-31 10:31:21 as ** along with 1 person jyuh
  • Reliable gene expression measurements from degraded RNA by quantitative real-time PCR depend on short amplicons and a proper normalization
    Laboratory Investigation, Vol. aop, No. current. (13 June 2005)
    by Janine Antonov, Darlene R Goldstein, Andrea Oberli, Anna Baltzer, Marco Pirotta, Achim Fleischmann, Hans J Altermatt, Rolf Jaggi
    posted to ffpe microarray_technology rt-pcr by jfr on 2007-07-30 16:33:25 as **
  • High-resolution copy number analysis of paraffin-embedded archival tissue using SNP BeadArrays.
    Genome Res (31 January 2007)
    by Jan Oosting, Esther H H Lips, Ronald van Eijk, Paul H C H Eilers, Károly Szuhai, Cisca Wijmenga, Hans Morreau, Tom van Wezel
    posted to copy-number ffpe by jfr on 2007-06-26 14:25:20 as read along with 1 person shigepong
  • Unravelling the proteome of formalin-fixed paraffin-embedded tissue.
    Brief Funct Genomic Proteomic, Vol. 5, No. 2. (June 2006), pp. 169-175.
    by BL Hood, TP Conrads, TD Veenstra
    posted to ffpe proteomics protocol by jfr on 2007-06-25 11:36:14 as * along with 1 person jyuh
  • Whole genome SNP arrays using DNA derived from formalin-fixed, paraffin-embedded ovarian tumor tissue.
    Hum Mutat, Vol. 26, No. 4. (October 2005), pp. 384-389.
    by ER Thompson, SC Herbert, SM Forrest, IG Campbell
    posted to copy-number ffpe ovarian_cancer by jfr on 2007-06-08 16:13:35 as * along with 1 person pcahan1
  • Measurement of gene expression in archival paraffin-embedded tissues: development and performance of a 92-gene reverse transcriptase-polymerase chain reaction assay.
    Am J Pathol, Vol. 164, No. 1. (January 2004), pp. 35-42.
    by M Cronin, M Pho, D Dutta, JC Stephans, S Shak, MC Kiefer, JM Esteban, JB Baker
    posted to ffpe by jfr on 2007-05-11 15:03:59 as read
  • Predicting response to primary chemotherapy: gene expression profiling of paraffin-embedded core biopsy tissue.
    Breast Cancer Res Treat (13 October 2006)
    by Lida Mina, Sharon E Soule, Sunil Badve, Fredrick L Baehner, Joffre Baker, Maureen Cronin, Drew Watson, Mei-Lan L Liu, George W Sledge, Steve Shak, Kathy D Miller
    posted to breast_cancer classification ffpe by jfr on 2007-05-10 17:48:22 as **
  • Methods for gene expression profiling in clinical trials of adjuvant breast cancer therapy.
    Clin Cancer Res, Vol. 12, No. 3 Pt 2. (1 February 2006)
    by S Paik
    posted to therapy rt-pcr review ffpe breast_cancer by jfr on 2007-02-06 14:32:12 as read
  • A population-based study of tumor gene expression and risk of breast cancer death among lymph node-negative patients
    Breast Cancer Research, Vol. 8 (31 May 2006), R25.
    by Laurel A Habel, Steven Shak, Marlena K Jacobs, Angela Capra, Claire Alexander, Mylan Pho, Joffre Baker, Michael Walker, Drew Watson, James Hackett, Noelle T Blick, Deborah Greenberg, Louis Fehrenbacher, Bryan Langholz, Charles P Quesenberry
  • Prognostic role of a multigene reverse transcriptase-PCR assay in patients with node-negative breast cancer not receiving adjuvant systemic therapy.
    Clin Cancer Res, Vol. 11, No. 9. (1 May 2005), pp. 3315-3319.
    by FJ Esteva, AA Sahin, M Cristofanilli, K Coombes, SJ Lee, J Baker, M Cronin, M Walker, D Watson, S Shak, GN Hortobagyi
    posted to rt-pcr ffpe classification breast_cancer by jfr on 2007-01-30 11:43:35 as **** along with 1 person frohike
  • Candidate Genes in Breast Cancer Revealed by Microarray-Based Comparative Genomic Hybridization of Archived Tissue
    Cancer Res, Vol. 65, No. 2. (15 January 2005), pp. 439-447.
    by Michelle Nessling, Karsten Richter, Carsten Schwaenen, Peter Roerig, Gunnar Wrobel, Swen Wessendorf, Bjorn Fritz, Martin Bentz, Hans-Peter Sinn, Bernhard Radlwimmer, Peter Lichter
    posted to ffpe breast_cancer array-cgh by jfr on 2007-01-30 09:41:10 as * along with 1 person rlmcinnes
  • Quantitative protein analysis from formalin-fixed tissues: implications for translational clinical research and nanoscale molecular diagnosis.
    J Pathol (28 November 2006)
    by K-F F Becker, C Schott, S Hipp, V Metzger, P Porschewski, R Beck, J Nährig, I Becker, H Höfler
    posted to proteomics ffpe by jfr on 2007-01-12 16:00:21 as * along with 1 person jyuh
  • Two-Dimensional Transcriptome Profiling: Identification of Messenger RNA Isoform Signatures in Prostate Cancer from Archived Paraffin-Embedded Cancer Specimens
    Cancer Res, Vol. 66, No. 8. (15 April 2006), pp. 4079-4088.
    by Hai-Ri Li, Jessica Wang-Rodriguez, Murlidharan T Nair, Joanne M Yeakley, Young-Soo Kwon, Marina Bibikova, Christina Zheng, Lixin Zhou, Kui Zhang, Tracy Downs, Xiang-Dong Fu, Jian-Bing Fan
    posted to ffpe alternative_splicing by jfr on 2007-01-11 09:44:29 as ** along with 3 people wutongbin vplagnol cberry
  • Quantitative gene expression profiling in formalin-fixed, paraffin-embedded tissues using universal bead arrays.
    Am J Pathol, Vol. 165, No. 5. (November 2004), pp. 1799-1807.
    by M Bibikova, D Talantov, E Chudin, JM Yeakley, J Chen, D Doucet, E Wickham, D Atkins, D Barker, M Chee, Y Wang, JB Fan
    posted to ffpe illumina microarray_technology by jfr on 2007-01-10 10:27:35 as read along with 1 person stsaft
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