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di indigoviolet no-tag [160 articles]

Articoli aggiunti di recente alla biblioteca di indigoviolet classificati sotto il tag no-tag. You can also see everyone's no-tag.
  • The Making of a Fly: The Genetics of Animal Design
    (15 April 1992)
    by Peter A Lawrence
    posted to no-tag by indigoviolet on 2007-12-15 03:00:50 as ** along with 1 group EisenLab
  • WebLogo: A Sequence Logo Generator
    Genome Res., Vol. 14, No. 6. (1 June 2004), pp. 1188-1190.
    by Gavin E Crooks, Gary Hon, John-Marc Chandonia, Steven E Brenner
    posted to no-tag by indigoviolet on 2007-12-12 15:10:45 as ** along with 4 people and 2 groups analogAI xiaobeizhao sobolevnrm yevishere EisenLab baker-group
  • Sequence logos: a new way to display consensus sequences.
    Nucleic Acids Res, Vol. 18, No. 20. (25 October 1990), pp. 6097-6100.
    by TD Schneider, RM Stephens
    posted to no-tag by indigoviolet on 2007-12-12 15:07:59 as ** along with 3 people and 1 group austin analogAI yevishere EisenLab
  • Selection of DNA binding sites by regulatory proteins. Statistical-mechanical theory and application to operators and promoters.
    J Mol Biol, Vol. 193, No. 4. (20 February 1987), pp. 723-750.
    by OG Berg, PH von Hippel
    posted to no-tag by indigoviolet on 2007-12-12 15:05:58 as ** along with 7 people and 2 groups zambujo brant jjray lusk discreteonyxorb cisevol Ema EisenLab cis-regulatory-evolution
  • An overview of the structures of protein-DNA complexes.
    Genome Biol, Vol. 1, No. 1. (2000)
    by NM Luscombe, SE Austin, HM Berman, JM Thornton
    posted to no-tag by indigoviolet on 2007-12-12 14:49:58 as ** along with 4 people and 1 group kaarsinogen medic0747 emptyhb jonsta247 EisenLab
  • Drosophila DNase I footprint database: a systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster.
    Bioinformatics, Vol. 21, No. 8. (15 April 2005), pp. 1747-1749.
    by CM Bergman, JW Carlson, SE Celniker
    posted to no-tag by indigoviolet on 2007-12-12 14:40:40 as ** along with 1 person and 2 groups yas EisenLab T_lab
  • GOstat: find statistically overrepresented Gene Ontologies within a group of genes.
    Bioinformatics, Vol. 20, No. 9. (12 June 2004), pp. 1464-1465.
    by T Beissbarth, TP Speed
    posted to no-tag by indigoviolet on 2007-12-12 14:40:11 as ** along with 6 people and 1 group ellakat Yanno miguel RMGraze jdiggans yevishere EisenLab
  • Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.
    Nat Genet, Vol. 25, No. 1. (May 2000), pp. 25-29.
    by M Ashburner, CA Ball, JA Blake, D Botstein, H Butler, JM Cherry, AP Davis, K Dolinski, SS Dwight, JT Eppig, MA Harris, DP Hill, L Issel-Tarver, A Kasarskis, S Lewis, JC Matese, JE Richardson, M Ringwald, GM Rubin, G Sherlock
    posted to no-tag by indigoviolet on 2007-12-12 14:35:50 as ** along with 31 people and 5 groups dgront marck carlk pablomendes CitoJam aalibes miguel dragonrez lfriedl chad_davis yas balajis benny dullhunk nirfriedman fisherp caporaso helliontroy zlu gurkanbebek djkt massivemayhem incovoma leechuck aconesa sgoetz javamint bootsy PunkRock natstreet naegele kdl Bioinformatics EisenLab T_lab biomedical-nlp
  • Temporal patterns of fruit fly (Drosophila) evolution revealed by mutation clocks.
    Mol Biol Evol, Vol. 21, No. 1. (January 2004), pp. 36-44.
    by K Tamura, S Subramanian, S Kumar
    posted to no-tag by indigoviolet on 2007-12-12 14:32:29 as ** along with 1 group EisenLab
  • Gene Recognition Via Spliced Sequence Alignment
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 93, No. 17. (1996), pp. 9061-9066.
    by Mikhail S Gelfand, Andrey A Mironov, Pavel A Pevzner
    posted to no-tag by indigoviolet on 2007-12-12 14:20:24 as ** along with 1 group EisenLab
  • Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase.
    Science, Vol. 249, No. 4968. (3 August 1990), pp. 505-510.
    by C Tuerk, L Gold
    posted to no-tag by indigoviolet on 2007-12-12 14:09:06 as ** along with 2 people and 2 groups jonathanjacobs leelarcombe Molecular Biology EisenLab
  • Basic local alignment search tool.
    J Mol Biol, Vol. 215, No. 3. (5 October 1990), pp. 403-410.
    by SF Altschul, W Gish, W Miller, EW Myers, DJ Lipman
    posted to no-tag by indigoviolet on 2007-07-15 14:19:11 as ** along with 40 people and 5 groups benwei ashaytan camster davidng evaf dragonrez jwm jmeppley Ayest RMGraze ea yas balajis alexg moborg arcticrasta dullhunk dgront caporaso michC myui BioNica CitoJam rabio timflutre lusk cjeans incovoma beatrizfernandez wenhan jtomasch GustavoLacerda sgoetz siebertm ichbins81 jofiel Thaverkamp shung marti hervelequere dbk-lab EisenLab T_lab biomedical-nlp Microbial-Ecology
  • Searching for genetic determinants in the new millennium
    Nature, Vol. 405, No. 6788. (15 June 2000), pp. 847-856.
    by Neil J Risch
    posted to no-tag by indigoviolet on 2007-07-10 11:18:05 as ** along with 1 person and 1 group raiyar EisenLab
  • Prospects for whole-genome linkage disequilibrium mapping of common disease genes.
    Nat Genet, Vol. 22, No. 2. (June 1999), pp. 139-144.
    by L Kruglyak
    posted to no-tag by indigoviolet on 2007-07-10 03:34:50 as ***** along with 1 group EisenLab
  • Advances in Genetics http://www.sciencedirect.com/science/bookseries/00652660
    posted to no-tag by indigoviolet on 2007-07-09 10:12:03 as ***** along with 1 group EisenLab
  • Linkage and association: basic concepts.
    Adv Genet, Vol. 42 (2001), pp. 45-66.
    by IB Borecki, BK Suarez
    posted to no-tag by indigoviolet on 2007-07-09 10:06:00 as ** along with 1 group EisenLab
  • Association study designs for complex diseases
    Nat Rev Genet, Vol. 2, No. 2. (2001), pp. 91-99.
    by LR Cardon, JI Bell
    posted to no-tag by indigoviolet on 2007-07-09 10:04:29 as ** along with 1 group EisenLab
  • Systematic detection of statistically overrepresented DNA motif association rules.
    Genome Inform, Vol. 17, No. 1. (2006), pp. 124-133.
    by JM Lin, Z Weng
    posted to no-tag by indigoviolet on 2007-06-15 09:48:10 as ** along with 1 person and 1 group dpollard EisenLab
  • Functional single nucleotide polymorphism-based association studies.
    Hum Genomics, Vol. 2, No. 6. (June 2006), pp. 391-402.
    by VE Carlton, JS Ireland, F Useche, M Faham
    posted to no-tag by indigoviolet on 2007-06-10 10:33:40 as ** along with 1 group EisenLab
  • Bioinformatics approaches and resources for single nucleotide polymorphism functional analysis.
    Brief Bioinform, Vol. 6, No. 1. (March 2005), pp. 44-56.
    by S Mooney
    posted to no-tag by indigoviolet on 2007-06-10 10:33:27 as **** along with 2 groups Bioinformatics EisenLab
  • Genome-wide association studies for common diseases and complex traits
    Nature Reviews Genetics, Vol. 6, No. 2. (01 February 2005), pp. 95-108.
    by Joel N Hirschhorn, Mark J Daly
    posted to no-tag by indigoviolet on 2007-06-10 10:33:16 as **** along with 4 people and 1 group caldavis oilcan massivemayhem dbgrant EisenLab
  • Linkage disequilibrium maps and association mapping.
    J Clin Invest, Vol. 115, No. 6. (June 2005), pp. 1425-1430.
    by NE Morton
    posted to no-tag by indigoviolet on 2007-06-10 10:32:46 as **** along with 1 group EisenLab
  • Strategies for the detection of copy number and other structural variants in the human genome.
    Hum Genomics, Vol. 2, No. 6. (June 2006), pp. 403-414.
    by AR Carson, L Feuk, M Mohammed, SW Scherer
    posted to no-tag by indigoviolet on 2007-06-10 10:31:07 as **** along with 1 person and 2 groups rdiaz Bioinformatics EisenLab
  • Clinical applications of whole-genome association studies: future applications at the bedside
    Expert Review of Molecular Diagnostics, Vol. 6, No. 4. (July 2006), pp. 551-565.
    by Motsinger, A Alison, Ritchie, D Marylyn, Dobrin, E Seth
    posted to no-tag by indigoviolet on 2007-06-10 10:30:39 as **** along with 1 group EisenLab
  • A gene-centric approach to genome-wide association studies
    Nature Reviews Genetics, Vol. 7, No. 11., pp. 885-891.
    by Eric Jorgenson, John S Witte
    posted to no-tag by indigoviolet on 2007-06-10 10:26:14 as ***** along with 5 people and 2 groups jyuh giovanni massivemayhem dbgrant jonsta247 EisenLab GeschwindLab
  • Genome-wide association studies: theoretical and practical concerns
    Nature Reviews Genetics, Vol. 6, No. 2. (01 February 2005), pp. 109-118.
    by William YS Wang, Bryan J Barratt, David G Clayton, John A Todd
    posted to no-tag by indigoviolet on 2007-06-10 10:25:58 as ***** along with 5 people and 1 group oilcan pcahan1 tabu joepickrell massivemayhem EisenLab
  • Insights into social insects from the genome of the honeybee Apis mellifera
    Nature, Vol. 444, No. 7118., pp. 512-512.
    by The
    posted to no-tag by indigoviolet on 2007-06-03 13:02:50 as ** along with 2 people dpollard annekarine
  • ARACHNE: A Whole-Genome Shotgun Assembler
    Genome Res., Vol. 12, No. 1. (1 January 2002), pp. 177-189.
    by Serafim Batzoglou, David B Jaffe, Ken Stanley, Jonathan Butler, Sante Gnerre, Evan Mauceli, Bonnie Berger, Jill P Mesirov, Eric S Lander
    posted to no-tag by indigoviolet on 2007-06-03 13:00:43 as ** along with 10 people and 3 groups pradiptaray Neeperando bpb dayjm balajis balicea ccr azazello wenhan tpreeprem EisenLab MBLAB gatech-compgenomics
  • Inparanoid: a comprehensive database of eukaryotic orthologs.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by KP O'Brien, M Remm, EL Sonnhammer
    posted to no-tag by indigoviolet on 2007-06-03 12:52:38 as ** along with 7 people and 1 group mdimmic tmmurali dragonrez tny bluto incovoma jandot EisenLab
  • 3D morphology and gene expression in the Drosophila blastoderm at cellular resolution II: dynamics
    Genome Biology, Vol. 7 (21 December 2006), R124.
    by Soile VE Keranen, Charless C Fowlkes, Cris, Damir Sudar, David W Knowles, Jitendra Malik, Mark D Biggin
    posted to no-tag by indigoviolet on 2007-06-03 12:51:13 as ** along with 1 person and 1 group dlmace EisenLab
  • 3D morphology and gene expression in the Drosophila blastoderm at cellular resolution I: data acquisition pipeline
    Genome Biology, Vol. 7 (21 December 2006), R123.
    by Cris, Soile VE Keranen, Charless C Fowlkes, Lisa Simirenko, Gunther H Weber, Angela H Depace, Clara Henriquez, David W Kaszuba, Bernd Hamann, Michael B Eisen, Jitendra Malik, Damir Sudar, Mark D Biggin, David W Knowles
    posted to no-tag by indigoviolet on 2007-06-03 12:50:23 as ** along with 1 group EisenLab
  • Inferring Noncoding RNA Families and Classes by Means of Genome-Scale Structure-Based Clustering
    PLoS Computational Biology, Vol. 3, No. 4. (1 April 2007), e65.
    by Sebastian Will, Kristin Reiche, Ivo L Hofacker, Peter F Stadler, Rolf Backofen
    posted to no-tag by indigoviolet on 2007-04-13 18:52:21 as ** along with 5 people and 2 groups andersbj mtagaya stajich zwang jayster4 EisenLab microRNA
  • Prediction of ligand binding site and functionally important residues based on fuzzy-oil-drop model
    PLoS Computational Biology, Vol. preprint, No. 2007. (1 April 2007), e94.eor.
    by Michal Brylinski, Katarzyna Prymula, Wiktor Jurkowski, Marek Kochanczyk, Ewa Stawowczyk, Leszek Konieczny, Irena Roterman
    posted to no-tag by indigoviolet on 2007-04-13 18:52:17 as ** along with 1 group EisenLab
  • The Human Genomic Melting Map
    PLoS Computational Biology, Vol. preprint, No. 2007. (1 April 2007), e93.eor.
    by Fang Liu, Eivind Tøstesen, Jostein K Sundet, Tor-Kristian Jenssen, Christoph Bock, Geir Jerstad, William G Thilly, Eivind Hovig
    posted to no-tag by indigoviolet on 2007-04-13 18:52:14 as ** along with 1 person and 1 group dylan77 EisenLab
  • Binding Site Graphs: A New Graph Theoretical Framework for Prediction of Transcription Factor Binding Sites
    PLoS Computational Biology, Vol. preprint, No. 2007. (1 April 2007), e90.eor.
    by Timothy E Reddy, Charles P Delisi, Boris Shakhnovich
    posted to no-tag by indigoviolet on 2007-04-13 18:52:01 as ** along with 1 group EisenLab
  • Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates
    Genome Res. (2007)
    by Hiroshi Kikuta, Mary Laplante, Pavla Navratilova, Anna Z Komisarczuk, Par G Engstrom, David Fredman, Altuna Akalin, Mario Caccamo, Ian Sealy, Kerstin Howe, Julien Ghislain, Guillaume Pezeron, Philippe Mourrain, Staale Ellingsen, Andrew C Oates, Christine Thisse, Bernard Thisse, Isabelle Foucher, Birgit Adolf, Andrea Geling, Boris Lenhard, Thomas S Becker
    posted to no-tag by indigoviolet on 2007-03-28 00:16:09 as ** along with 1 group EisenLab
  • Transcriptional Control in the Segmentation Gene Network of Drosophila
    PLoS Biology, Vol. 2, No. 9. (1 September 2004), e271.
    by Mark D Schroeder, Michael Pearce, John Fak, Hongqing Fan, Ulrich Unnerstall, Eldon Emberly, Nikolaus Rajewsky, Eric D Siggia, Ulrike Gaul
    posted to no-tag by indigoviolet on 2007-03-22 21:11:19 as ** along with 5 people and 3 groups dpollard adepace wrowell emptyhb dlmace EisenLab Cline_lab UH - Computational Biology
  • The Regulatory Code for Transcriptional Response Diversity and Its Relation to Genome Structural Properties in A. thaliana
    PLoS Genetics, Vol. 3, No. 2. (1 February 2007), e11.
    by Dirk Walther, Roman Brunnemann, Joachim Selbig
    posted to no-tag by indigoviolet on 2007-02-09 23:45:54 as ** along with 5 people and 2 groups Borelli kengg saru braingrind byy EisenLab Plantandetc
  • Indelign: a probabilistic framework for annotation of insertions and deletions in a multiple alignment
    Bioinformatics, Vol. 23, No. 3. (1 February 2007), pp. 289-297.
    by Jaebum Kim, Saurabh Sinha
    posted to no-tag by indigoviolet on 2007-02-09 10:26:35 as ** along with 1 person and 1 group aprasad EisenLab
  • Parallel evolution of conserved noncoding elements that target a common set of developmental regulatory genes from worms to humans.
    Genome Biology, Vol. 8 (02 February 2007), R15.
    by Tanya Vavouri, Klaudia Walter, Walter R Gilks, Ben Lehner, Greg Elgar
    posted to no-tag by indigoviolet on 2007-02-09 10:20:20 as ** along with 7 people and 2 groups smbe2008 dpollard adepace djkt sujaikumar Stew cisevol EisenLab cis-regulatory-evolution
  • Boosting with stumps for predicting transcription start sites
    Genome Biology, Vol. 8 (02 February 2007), R17.
    by Xiaoyue Zhao, Zhenyu Xuan, Michael Q Zhang
    posted to no-tag by indigoviolet on 2007-02-09 10:20:12 as ** along with 2 people and 1 group carlk leelisax EisenLab
  • Creating a honey bee consensus gene set
    Genome Biology, Vol. 8 (22 January 2007), R13.
    by Christine G Elsik, Aaron J Mackey, Justin T Reese, Natalia V Milshina, David S Roos, George M Weinstock
    posted to no-tag by indigoviolet on 2007-02-09 10:09:02 as ** along with 1 group EisenLab
  • Bounded search for de novo identification of degenerate cis-regulatory elements.
    BMC Bioinformatics, Vol. 7 (2006)
    by JM Carlson, A Chakravarty, RS Khetani, RH Gross
    posted to no-tag by indigoviolet on 2007-02-03 00:24:10 as ** along with 1 person and 1 group dquest EisenLab
  • New Small Nuclear RNA Gene-Like Transcriptional Units as Sources of Regulatory Transcripts
    PLoS Genetics, Vol. 3, No. 2. (1 February 2007), e1.
    by Aldo Pagano, Manuele Castelnuovo, Federico Tortelli, Roberto Ferrari, Giorgio Dieci, Ranieri Cancedda
    posted to no-tag by indigoviolet on 2007-02-03 00:19:14 as ** along with 1 group EisenLab
  • Monotony of surprise and large-scale quest for unusual words.
    J Comput Biol, Vol. 10, No. 3-4. (2003), pp. 283-311.
    by A Apostolico, ME Bock, S Lonardi
    posted to no-tag by indigoviolet on 2007-02-03 00:17:03 as ** along with 1 group EisenLab
  • Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach.
    Genome Biol, Vol. 6, No. 2. (2005)
    by O Elemento, S Tavazoie
    posted to no-tag by indigoviolet on 2007-02-03 00:14:24 as ** along with 2 people and 2 groups nklee grahamc EisenLab ParkinsonLab_at_MaRS
  • Phylogeny based discovery of regulatory elements.
    BMC Bioinformatics, Vol. 7 (2006)
    by J Gertz, JC Fay, BA Cohen
    posted to no-tag by indigoviolet on 2007-02-03 00:14:12 as ** along with 2 people and 2 groups dquest cisevol EisenLab cis-regulatory-evolution
  • Discovery of regulatory elements in vertebrates through comparative genomics
    Nature Biotechnology, Vol. 23, No. 10. (06 October 2005), pp. 1249-1256.
    by Amol Prakash, Martin Tompa
    posted to no-tag by indigoviolet on 2007-02-03 00:14:03 as ** along with 2 people and 3 groups aprasad dchughes EisenLab G4ID Genetics-of-Gambling
  • Robustness Can Evolve Gradually in Complex Regulatory Gene Networks with Varying Topology
    PLoS Computational Biology, Vol. 3, No. 2. (1 February 2007), e15.
    by Stefano Ciliberti, Olivier C Martin, Andreas Wagner
    posted to no-tag by indigoviolet on 2007-02-02 19:17:20 as ** along with 14 people and 5 groups eldan ccots emilyhare malcook entropy nickluscombe aswin kengg dolhuis timflutre grahamc shigepong kynn carneiro EisenLab EBI-regulation SNE ParkinsonLab_at_MaRS Plantandetc
  • Serum response factor binding sites differ in three human cell types
    Genome Res., Vol. 17, No. 2. (1 February 2007), pp. 136-144.
    by Sara J Cooper, Nathan D Trinklein, Loan Nguyen, Richard M Myers
    posted to no-tag by indigoviolet on 2007-02-02 18:02:30 as ** along with 1 person and 1 group caseybrown EisenLab
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