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di hplatero library [549 articles]

Articoli aggiunti di recente nella biblioteca di hplatero .
  • A systems approach to delineate functions of paralogous transcription factors: Role of the Yap family in the DNA damage response
    PNAS, Vol. 105, No. 8. (26 February 2008), pp. 2934-2939.
    by Kai
    posted to yap6 bzip by hplatero on 2008-10-02 22:43:54 as **
  • Predicting functional transcription factor binding through alignment-free and affinity-based analysis of orthologous promoter sequences
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i165-171.
    by Lucas D Ward, Harmen J Bussemaker
    posted to yap6 bzip by hplatero on 2008-10-02 22:40:27 as ** along with 2 people xili03 maximilianh
  • A genome-wide analysis in Saccharomyces cerevisiae demonstrates the influence of chromatin modifiers on transcription
    Nature Genetics, Vol. 39, No. 3. (26 February 2007), pp. 303-309.
    by Israel Steinfeld, Ron Shamir, Martin Kupiec
    posted to yap6 bzip by hplatero on 2008-10-02 22:15:34 as ** along with 1 person zwang
  • Colloquium Papers: Genomic analysis of the hierarchical structure of regulatory networks
    PNAS, Vol. 103, No. 40. (3 October 2006), pp. 14724-14731.
    by Haiyuan Yu, Mark Gerstein
    posted to yap6 bzip by hplatero on 2008-10-02 21:20:16 as ** along with 3 people bootsy RobMills dquest
  • Genome-wide prediction and characterization of interactions between transcription factors in Saccharomyces cerevisiae
    Nucleic Acids Research, Vol. 34, No. 3. (2006), pp. 917-927.
    by Xueping Yu, Jimmy Lin, Tomohiro Masuda, Noriko Esumi, Donald J Zack, Jiang Qian
    posted to yap6 bzip by hplatero on 2008-10-02 20:39:09 as ** along with 2 people olympos snow_dragon
  • A latent variable model for chemogenomic profiling
    Bioinformatics, Vol. 21, No. 15. (1 August 2005), pp. 3286-3293.
    by Patrick Flaherty, Guri Giaever, Jochen Kumm, Michael I Jordan, Adam P Arkin
    posted to yap6 bzip by hplatero on 2008-10-02 20:33:37 as **
  • Validation and refinement of gene-regulatory pathways on a network of physical interactions.
    Genome Biol, Vol. 6, No. 7. (2005)
    by CH Yeang, HC Mak, S McCuine, C Workman, T Jaakkola, T Ideker
    posted to bzip by hplatero on 2008-10-02 20:23:49 as ** along with 12 people and 1 group snuppepuppan abhik tmmurali textoris wnpx noano koller ccr cdppublications AlexanderPico carlk jago CDP
  • Mitochondrial fission proteins regulate programmed cell death in yeast
    Genes Dev., Vol. 18, No. 22. (15 November 2004), pp. 2785-2797.
    by Yihru Fannjiang, Wen-Chih Cheng, Sarah J Lee, Bing Qi, Jonathan Pevsner, Michael J Mccaffery, Blake R Hill, Gorka Basanez, Marie J Hardwick
    posted to apoptosis cit1 by hplatero on 2008-07-18 20:51:04 as **
  • Protein Kinase C Signaling Mediates a Program of Cell Cycle Withdrawal in the Intestinal Epithelium
    J. Cell Biol., Vol. 151, No. 4. (13 November 2000), pp. 763-778.
    by Mark R Frey, Jennifer A Clark, Olga Leontieva, Joshua M Uronis, Adrian R Black, Jennifer D Black
    posted to g0 by hplatero on 2008-06-24 00:56:32 as **
  • Caspase-dependent apoptosis in yeast
    Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, Vol. 1783, No. 7. (July 2008), pp. 1320-1327.
    by Cristina Mazzoni, Claudio Falcone
    posted to apoptosis yca1 by hplatero on 2008-06-23 19:02:09 as **
  • Global analysis of protein localization in budding yeast.
    Nature, Vol. 425, No. 6959. (16 October 2003), pp. 686-691.
    by WK Huh, JV Falvo, LC Gerke, AS Carroll, RW Howson, JS Weissman, EK O'Shea
    posted to gfp by hplatero on 2008-06-20 19:10:09 as ** along with 10 people and 2 groups tharris Cortel lfriedl opheliav rebeccahainess nirfriedman gurkanbebek koller raiyar iris_2001 C. elegans / WormBase kdl
  • Global landscape of protein complexes in the yeast Saccharomyces cerevisiae
    Nature (22 March 2006)
    by Nevan J Krogan, Gerard Cagney, Haiyuan Yu, Gouqing Zhong, Xinghua Guo, Alexandr Ignatchenko, Joyce Li, Shuye Pu, Nira Datta, Aaron P Tikuisis, Thanuja Punna, Josã© M Peregrã­n-Alvarez, Michael Shales, Xin Zhang, Michael Davey, Mark D Robinson, Alberto Paccanaro, James E Bray, Anthony Sheung, Bryan Beattie, Dawn P Richards, Veronica Canadien, Atanas Lalev, Frank Mena, Peter Wong, Andrei Starostine, Myra M Canete, James Vlasblom, Samuel Wu, Chris Orsi, Sean R Collins, Shamanta Chandran, Robin Haw, Jennifer J Rilstone, Kiran Gandi, Natalie J Thompson, Gabe Musso, Peter St Onge, Shaun Ghanny, Mandy HY Lam, Gareth Butland, Amin M Altaf-Ul, Shigehiko Kanaya, Ali Shilatifard, Erin O'Shea, Jonathan S Weissman, James C Ingles, Timothy R Hughes, John Parkinson, Mark Gerstein, Shoshana J Wodak, Andrew Emili, Jack F Greenblatt
    posted to gfp by hplatero on 2008-06-20 19:00:21 as ** along with 22 people and 4 groups jiny Borelli lfriedl chad_davis balajis marcius tardigrade nirfriedman balabu j3xucite nickluscombe koller raiyar cjeans nicoleq Evangelia csaveanu frohike carlk chasmand mapplab ethkim kdl EBI-regulation BioinfoCIPF SGU-CIPF
  • Preadaptation to efficient respiratory maintenance is essential both for maximal longevity and the retention of replicative potential in chronologically ageing yeast
    Mechanisms of Ageing and Development, Vol. 127, No. 9. (September 2006), pp. 733-740.
    by Peter W Piper, Nicholas L Harris, Morag Maclean
    posted to cit1 g0 by hplatero on 2008-06-19 23:57:59 as **
  • The amino acid sensitive TOR pathway from yeast to mammals.
    FEBS Lett, Vol. 580, No. 12. (22 May 2006), pp. 2821-2829.
    by SG Dann, G Thomas
    posted to cit1 by hplatero on 2008-06-19 23:52:12 as ** along with 2 people jyuh jjohnson17
  • Effect of the pho85 Mutation on Catabolite Repression of the CIT1 Gene in Yeasts Saccharomyces cerevisiae
    Russian Journal of Genetics, Vol. 39, No. 6. (1 June 2003), pp. 604-609.
    by MV Padkina, SA Tarasov, SL Karsten, LV Parfenova, Yu Popova, EV Sambuk
    posted to cit1 by hplatero on 2008-06-19 23:45:27 as **
  • Yeast mother cell-specific ageing, genetic (in)stability, and the somatic mutation theory of ageing.
    Nucleic acids research, Vol. 35, No. 22. (2007), pp. 7514-7526.
    by P Laun, CV Bruschi, JR Dickinson, M Rinnerthaler, G Heeren, R Schwimbersky, R Rid, M Breitenbach
    posted to apoptosis by hplatero on 2008-06-19 22:30:53 as **
  • Global protein expression profiling of budding yeast in response to DNA damage
    Yeast, Vol. 24 (2007), pp. 145-154.
    by Min-Woo, Eun-Jung
    posted to dna_damage by hplatero on 2008-05-30 22:32:08 as **
  • Mediator comes of age
    TRENDS in Biochemical Science, Vol. 30, No. 5. (May 2005)
    by Roger D Kornberg
    posted to mediator by hplatero on 2008-05-30 22:24:26 as **
  • Close encounters of many kinds: Fos-Jun interactions that mediate transcription regulatory specificity
    Oncogene, Vol. 20, No. 19. (April 2001), pp. 2438-2452.
    by Yurii
    posted to bzip by hplatero on 2008-05-30 22:20:50 as **
  • Rapamycin-modulated transcription defines the subset of nutrient-sensitive signaling pathways directly controlled by the Tor proteins.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 96, No. 26. (21 December 1999), pp. 14866-14870.
    by JS Hardwick, FG Kuruvilla, JK Tong, AF Shamji, SL Schreiber
    posted to rap by hplatero on 2008-05-29 23:48:49 as **
  • The transcriptome of prematurely aging yeast cells is similar to that of telomerase-deficient cells.
    Mol Biol Cell, Vol. 15, No. 3. (March 2004), pp. 1297-1312.
    by I Lesur, JL Campbell
    posted to acs1 cit1 by hplatero on 2008-05-29 00:58:59 as ** along with 1 person dbenn
  • Ammonia Pulses and Metabolic Oscillations Guide Yeast Colony Development
    Mol. Biol. Cell, Vol. 13, No. 11. (1 November 2002), pp. 3901-3914.
    by Zdena Palkova, Frederic Devaux, Marketa Ricicova, Lucie Minarikova, Stephane Le Crom, Claude Jacq
    posted to acs1 by hplatero on 2008-05-29 00:43:39 as **
  • Rapamycin Induces the G0 Program of Transcriptional Repression in Yeast by Interfering with the TOR Signaling Pathway
    Mol. Cell. Biol., Vol. 18, No. 8. (1 August 1998), pp. 4463-4470.
    by Dean Zaragoza, Ataollah Ghavidel, Joseph Heitman, Michael C Schultz
    posted to tor_signaling by hplatero on 2008-05-25 04:50:11 as **
  • Senescence and apoptosis in yeast mother cell-specific aging and in higher cells: A short review.
    Biochimica et biophysica acta (4 March 2008)
    by Peter Laun, Gino Heeren, Mark Rinnerthaler, Raphaela Rid, Sonja Kössler, Lore Koller, Michael Breitenbach
    posted to apoptosis by hplatero on 2008-05-24 22:31:10 as **
  • Yeast apoptosis--From genes to pathways
    Seminars in Cancer Biology, Vol. 17, No. 2. (April 2007), pp. 112-121.
    by Kai-Uwe Fröhlich, Heike Fussi, Christoph Ruckenstuhl
    posted to apoptosis by hplatero on 2008-05-21 22:49:59 as **
  • The actin cytoskeleton, RAS-cAMP signaling and mitochondrial ROS in yeast apoptosis.
    Trends Cell Biol (12 October 2005)
    by Michael Breitenbach, Peter Laun, Mario Gimona
    posted to apoptosis by hplatero on 2008-05-20 23:06:48 as ** along with 2 people imouthesmp egralla
  • Role for yeast inhibitor of apoptosis (IAP)-like proteins in cell division
    Proceedings of the National Academy of Sciences, Vol. 96, No. 18. (31 August 1999), pp. 10170-10175.
    by Anthony G Uren, Traude Beilharz, Matthew J O'Connell, Sarah J Bugg, Rosemary van Driel, David L Vaux, Trevor Lithgow
    posted to apoptosis by hplatero on 2008-05-20 22:46:45 as **
  • The inhibitor-of-apoptosis protein Bir1p protects against apoptosis in S. cerevisiae and is a substrate for the yeast homologue of Omi/HtrA2
    J Cell Sci, Vol. 119, No. 9. (1 May 2006), pp. 1843-1851.
    by David Walter, Silke Wissing, Frank Madeo, Birthe Fahrenkrog
    posted to apoptosis by hplatero on 2008-05-20 21:54:02 as **
  • Why yeast cells can undergo apoptosis: death in times of peace, love, and war
    J. Cell Biol., Vol. 175, No. 4. (20 November 2006), pp. 521-525.
    by Sabrina Buttner, Tobias Eisenberg, Eva Herker, Didac Carmona-Gutierrez, Guido Kroemer, Frank Madeo
    posted to apoptosis by hplatero on 2008-05-20 19:26:37 as **
  • A Truncated Form of KlLsm4p and the Absence of Factors Involved in mRNA Decapping Trigger Apoptosis in Yeast
    Mol. Biol. Cell, Vol. 14, No. 2. (1 February 2003), pp. 721-729.
    by Cristina Mazzoni, Patrizia Mancini, Loredana Verdone, Frank Madeo, Agnese Serafini, Eva Herker, Claudio Falcone
    posted to apoptosis by hplatero on 2008-05-20 19:11:10 as **
  • Sugar-induced apoptosis in yeast cells
    FEMS Yeast Research, Vol. 4, No. 1. (2003), pp. 7-13.
    by David Granot, Alex Levine, Edan D Hefetz
    posted to apoptosis by hplatero on 2008-05-20 17:33:52 as **
  • Apoptosis in yeast: a new model for aging research
    Experimental Gerontology, Vol. 37, No. 1. (December 2001), pp. 27-31.
    by Kai-Uwe Fröhlich, Frank Madeo
    posted to apoptosis by hplatero on 2008-05-20 17:32:00 as **
  • Molecular signatures of proliferation and quiescence in hematopoietic stem cells.
    PLoS biology, Vol. 2, No. 10. (October 2004)
    by TA Venezia, AA Merchant, CA Ramos, NL Whitehouse, AS Young, CA Shaw, MA Goodell
    posted to quiescence by hplatero on 2008-05-20 00:06:52 as **
  • Dimers, leucine zippers and DNA-binding domains.
    Trends in genetics : TIG, Vol. 6, No. 2. (February 1990), pp. 36-40.
    by SJ Busch, P Sassone-Corsi
    posted to bzip by hplatero on 2008-05-19 20:55:42 as **
  • The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins.
    Science, Vol. 240 (1988), pp. 1759-1764.
    by Landschulz
    posted to bzip by hplatero on 2008-05-19 20:55:24 as **
  • Yeast putative transcription factors involved in salt tolerance
    FEBS Letters, Vol. 425, No. 2. (27 March 1998), pp. 323-328.
    by Iratxe Mendizabal, Gabino Rios, Jose M Mulet, Ramón Serrano, Iñigo F de Larrinoa
    posted to bzip cin5 yap6 by hplatero on 2008-05-16 22:19:38 as **
  • Effects of side-chain characteristics on stability and oligomerization state of a de novo-designed model coiled-coil: 20 amino acid substitutions in position "d".
    J Mol Biol, Vol. 300, No. 2. (7 July 2000), pp. 377-402.
    by B Tripet, K Wagschal, P Lavigne, CT Mant, RS Hodges
    posted to bzip by hplatero on 2008-05-16 00:09:27 as ** along with 2 people cjeans ca3295
  • Leucine Is the Most Stabilizing Aliphatic Amino Acid in the d Position of a Dimeric Leucine Zipper Coiled Coil
    Biochemistry, Vol. 36 (1997), pp. 12567-12573.
    by Jaideep
    posted to bzip by hplatero on 2008-05-16 00:01:54 as **
  • ATF-2 Is a Common Nuclear Target of Smad and TAK1 Pathways in Transforming Growth Factor-beta Signaling
    J. Biol. Chem., Vol. 274, No. 13. (26 March 1999), pp. 8949-8957.
    by Yuji Sano, Jun Harada, Shigeki Tashiro, Ryoko Gotoh-Mandeville, Toshio Maekawa, Shunsuke Ishii
    posted to atf creb by hplatero on 2008-05-15 07:09:23 as **
  • Protection from Oxidative Stress-Induced Apoptosis in Cortical Neuronal Cultures by Iron Chelators Is Associated with Enhanced DNA Binding of Hypoxia-Inducible Factor-1 and ATF-1/CREB and Increased Expression of Glycolytic Enzymes, p21waf1/cip1, and Erythropoietin
    J. Neurosci., Vol. 19, No. 22. (15 November 1999), pp. 9821-9830.
    by Khalequz Zaman, Hoon Ryu, David Hall, Kevin O'Donovan, Kuo-I Lin, Matthew P Miller, John C Marquis, Jay M Baraban, Gregg L Semenza, Rajiv R Ratan
    posted to atf creb by hplatero on 2008-05-15 07:04:26 as **
  • Phosphorylation of MafA Is Essential for Its Transcriptional and Biological Properties
    Mol. Cell. Biol., Vol. 21, No. 14. (15 July 2001), pp. 4441-4452.
    by Sofia Benkhelifa, Sylvain Provot, Eugene Nabais, Alain Eychene, Georges Calothy, Marie-Paule Felder-Schmittbuhl
    posted to maf by hplatero on 2008-05-15 01:20:54 as **
  • A Conserved Transcription Motif Suggesting Functional Parallels between Caenorhabditis elegans SKN-1 and Cap`n'Collar-related Basic Leucine Zipper Proteins
    J. Biol. Chem., Vol. 275, No. 29. (14 July 2000), pp. 22166-22171.
    by Amy K Walker, Raymond See, Ceri Batchelder, Thip Kophengnavong, Timothy J Gronniger, Yang Shi, Keith T Blackwell
    posted to skn-1 by hplatero on 2008-05-15 01:16:59 as ** along with 1 person and 1 group tharris C. elegans / WormBase
  • Homology between the DNA-Binding Domain of the GCN4 Regulatory Protein of Yeast and the Carboxyl-Terminal Region of a Protein Coded for by the Oncogene jun
    Proceedings of the National Academy of Sciences, Vol. 84, No. 10. (15 May 1987), pp. 3316-3319.
    by Peter K Vogt, Timothy J Bos, Russell F Doolittle
    posted to first_paper by hplatero on 2008-05-14 08:16:29 as **
  • Reconstruction of ancestral protein interaction networks for the bZIP transcription factors
    Proceedings of the National Academy of Sciences (12 December 2007), 0706339104.
    by John W Pinney, Grigoris D Amoutzias, Magnus Rattray, David L Robertson
    posted to bzip by hplatero on 2008-05-14 07:20:37 as ** along with 4 people tmmurali grahamc cjeans Pao-Yang
  • AP-1 subunits: quarrel and harmony among siblings
    J Cell Sci, Vol. 117, No. 25. (1 December 2004), pp. 5965-5973.
    by Jochen Hess, Peter Angel, Marina Schorpp-Kistner
    posted to bzip by hplatero on 2008-05-14 07:05:51 as **
  • A heteromeric complex containing the centromere binding factor 1 and two basic leucine zipper factors, Met4 and Met28, mediates the transcription activation of yeast sulfur metabolism.
    The EMBO journal, Vol. 15, No. 10. (15 May 1996), pp. 2519-2529.
    by L Kuras, H Cherest, Y Surdin-Kerjan, D Thomas
    posted to first_paper by hplatero on 2008-05-14 06:20:02 as **
  • Aca1 and Aca2, ATF/CREB Activators in Saccharomyces cerevisiae, Are Important for Carbon Source Utilization but Not the Response to Stress
    Mol. Cell. Biol., Vol. 20, No. 12. (15 June 2000), pp. 4340-4349.
    by Adelaida M Garcia-Gimeno, Kevin Struhl
    posted to first_paper by hplatero on 2008-05-14 05:09:31 as **
  • Identification and purification of a Saccharomyces cerevisiae protein with the DNA binding specificity of mammalian activating transcription factor.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 86, No. 1. (January 1989), pp. 109-113.
    by YS Lin, MR Green
    posted to bzip by hplatero on 2008-05-14 04:57:12 as **
  • Signaling by target of rapamycin proteins in cell growth control.
    Microbiol Mol Biol Rev, Vol. 69, No. 1. (March 2005), pp. 79-100.
    by K Inoki, H Ouyang, Y Li, KL Guan
    posted to rapamycin tor by hplatero on 2008-05-12 08:11:08 as ** along with 2 people jyuh qazwsx
  • Reactive oxygen species and yeast apoptosis
    Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, Vol. In Press, Corrected Proof
    by Gabriel G Perrone, Shi-Xiong Tan, Ian W Dawes
    posted to apoptosis by hplatero on 2008-05-09 18:31:59 as **
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