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di heliopais gene_sets [24 articles]

Articoli aggiunti di recente alla biblioteca di heliopais classificati sotto il tag gene_sets. You can also see everyone's gene_sets.
  • Individual mRNA expression profiles reveal the effects of specific microRNAs
    Genome Biology, Vol. 9 (16 May 2008), R82.
    by Amit Arora, David AC Simpson
    posted to microrna gene_sets by heliopais on 2008-06-11 14:54:50 as ***** along with 1 person and 1 group imtechnology microRNA
  • GlobalANCOVA: exploration and assessment of gene group effects
    Bioinformatics, Vol. 24, No. 1. (17 November 2007), pp. 78-85.
    by Manuela Hummel, Reinhard Meister, Ulrich Mansmann
    edited by John Quackenbush
    posted to gene_sets by heliopais on 2008-05-27 16:54:02 as ** along with 2 people jyuh ealloza
  • Discovering statistically significant pathways in expression profiling studies.
    Proc Natl Acad Sci U S A, Vol. 102, No. 38. (20 September 2005), pp. 13544-13549.
    by L Tian, SA Greenberg, SW Kong, J Altschuler, IS Kohane, PJ Park
    posted to gene_sets by heliopais on 2008-05-20 12:28:43 as ** along with 7 people and 1 group giovenko srp33 dragonrez maryee ealloza frohike justescaped BioinfoCIPF
  • Computation of significance scores of unweighted Gene Set Enrichment Analyses
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Andreas Keller, Christina Backes, Hans P Lenhof
    posted to gene_sets by heliopais on 2008-05-16 15:48:02 as ** along with 4 people and 1 group jfr ealloza shigepong GeeSharpMinor BioinfoCIPF
  • Gene expression network analysis and applications to immunology
    Bioinformatics, Vol. 23, No. 7. (1 April 2007), pp. 850-858.
    by Nacu, Serban, Critchley-Thorne, Rebecca, Lee, Peter, Holmes, Susan
    posted to gene_sets by heliopais on 2008-05-16 14:52:36 as ****
  • Circumventing the cut-off for enrichment analysis
    Brief Bioinform, Vol. 7, No. 2. (1 June 2006), pp. 202-203.
    by Eitan Rubin
    posted to gene_sets by heliopais on 2008-05-15 12:21:22 as **
  • PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes.
    Nat Genet, Vol. 34, No. 3. (July 2003), pp. 267-273.
    by VK Mootha, CM Lindgren, KF Eriksson, A Subramanian, S Sihag, J Lehar, P Puigserver, E Carlsson, M Ridderstråle, E Laurila, N Houstis, MJ Daly, N Patterson, JP Mesirov, TR Golub, P Tamayo, B Spiegelman, ES Lander, JN Hirschhorn, D Altshuler, LC Groop
    posted to gene_sets by heliopais on 2008-05-15 12:02:42 as ** along with 6 people and 2 groups magusina dragonrez maryee ealloza giovanni shikin BioinfoCIPF GeschwindLab
  • Statistical concerns about the GSEA procedure.
    Nat Genet, Vol. 36, No. 7. (July 2004)
    by D Damian, M Gorfine
    posted to gene_sets commentary by heliopais on 2008-05-15 11:45:59 as ** along with 2 people and 1 group ealloza schuylrp BioinfoCIPF
  • GeneTrail--advanced gene set enrichment analysis.
    Nucleic Acids Res, Vol. 35, No. Web Server issue. (1 July 2007)
    by C Backes, A Keller, J Kuentzer, B Kneissl, N Comtesse, YA Elnakady, R Müller, E Meese, HP Lenhof
    posted to gene_sets by heliopais on 2008-05-15 09:55:14 as ** along with 2 people jyuh jfr
  • Gene-set approach for expression pattern analysis
    Brief Bioinform (17 January 2008), bbn001.
    by Dougu Nam, Seon-Young Kim
    posted to gene_sets by heliopais on 2008-05-14 13:56:44 as ** along with 9 people klo beete yas tmmurali AlexanderPico giovenko lp2 seemu thomaskelder
  • Inferring biological functions and associated transcriptional regulators using gene set expression coherence analysis
    BMC Bioinformatics, Vol. 8 (17 November 2007), 453.
    by Tae-Min Kim, Yeun-Jun Chung, Mun-Gan Rhyu, Myeong H Jung
    posted to gene_sets by heliopais on 2008-05-14 13:45:26 as ** along with 2 people jfr ealloza
  • PAGE: parametric analysis of gene set enrichment.
    BMC Bioinformatics, Vol. 6 (2005)
    by SY Kim, DJ Volsky
    posted to gene_sets by heliopais on 2008-05-14 12:30:01 as *** along with 5 people and 1 group giovenko srp33 ealloza jdiggans waghsk BioinfoCIPF
  • A multivariate extension of the gene set enrichment analysis.
    J Bioinform Comput Biol, Vol. 5, No. 5. (October 2007), pp. 1139-1153.
    by L Klebanov, G Glazko, P Salzman, A Yakovlev, Y Xiao
    posted to gene_sets by heliopais on 2008-04-24 15:23:31 as *** along with 2 people ealloza waghsk
  • Extensions to gene set enrichment
    Bioinformatics, Vol. 23, No. 3. (1 February 2007), pp. 306-313.
    by Zhen Jiang, Robert Gentleman
    posted to gene_sets by heliopais on 2008-04-24 13:46:39 as ** along with 5 people and 1 group magusina giovenko ealloza djkt waghsk BioinfoCIPF
  • Comparative evaluation of gene-set analysis methods
    BMC Bioinformatics, Vol. 8 (07 November 2007), 431.
    by Qi Liu, Irina Dinu, Adeniyi J Adewale, John D Potter, Yutaka Yasui
    posted to gene_sets by heliopais on 2008-04-24 12:00:12 as ** along with 4 people jfr ealloza shigepong idonaldson
  • Analyzing gene expression data in terms of gene sets: methodological issues.
    Bioinformatics (15 February 2007)
    by Jelle J J Goeman, Peter Bühlmann
    posted to gene_sets by heliopais on 2008-04-24 10:12:19 as ** along with 5 people and 2 groups diging_data jyuh jfr ealloza shigepong BTS-PT-AS-CS BioinfoCIPF
  • Pathway Analysis of Microarray Data via Regression
    Journal of Computational Biology, Vol. 0, No. 0. (0), pp. 1-9.
    by AJ Adewale, I Dinu, JD Potter, Q Liu, Y Yasui
    posted to gene_sets by heliopais on 2008-04-24 10:01:49 as ** along with 6 people AlexanderPico jyuh jfr tmmurali csgillespie huali
  • Improving gene set analysis of microarray data by SAM-GS
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Irina Dinu, John Potter, Thomas Mueller, Qi Liu, Adeniyi Adewale, Gian Jhangri, Gunilla Einecke, Konrad Famulski, Philip Halloran, Yutaka Yasui
    posted to gene_sets by heliopais on 2008-04-24 09:37:59 as **** along with 7 people and 1 group jfr ealloza shigepong ghattem GeeSharpMinor waghsk LuigiAugugliaro BioinfoCIPF
  • Random-set methods identify distinct aspects of the enrichment signal in gene-set analysis
    The Annals of Applied Statistics, Vol. 1, No. 1. (June 2007), pp. 85-106.
    by Michael A Newton, Fernando A Quintana, Johan A Den Boon, Srikumar Sengupta, Paul Ahlquist
    posted to random_set gene_sets by heliopais on 2008-02-29 14:46:20 as read
  • Genome-Wide Expression Profiling Reveals EBV-Associated Inhibition of MHC Class I Expression in Nasopharyngeal Carcinoma
    Cancer Res, Vol. 66, No. 16. (15 August 2006), pp. 7999-8006.
    by Srikumar Sengupta, Johan A den Boon, I-How Chen, Michael A Newton, David B Dahl, Meng Chen, Yu-Juen Cheng, William H Westra, Chien-Jen Chen, Allan Hildesheim, Bill Sugden, Paul Ahlquist
    posted to gene_sets by heliopais on 2008-02-29 14:37:08 as ***
  • GSEA-P: A desktop application for Gene Set Enrichment Analysis
    Bioinformatics (20 July 2007), btm369.
    by Aravind Subramanian, Heidi Kuehn, Joshua Gould, Pablo Tamayo, Jill P Mesirov
    posted to tools gsea gene_sets by heliopais on 2008-02-29 13:53:41 as read along with 8 people and 1 group Eugene jyuh cassj ealloza schuylrp barriot waszak dmontaner BioinfoCIPF
  • Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
    Proceedings of the National Academy of Sciences of the USA, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550.
    by Aravind Subramanian, Pablo Tamayo, Vamsi K Mootha, Sayan Mukherjee, Benjamin L Ebert, Michael A Gillette, Amanda Paulovich, Scott L Pomeroy, Todd R Golub, Eric S Lander, Jill P Mesirov
    posted to gene_sets by heliopais on 2008-02-27 09:52:21 as read along with 20 people and 4 groups ellakat ihpark srp33 dragonrez jfr balajis maryee xwbcn hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet shikin waghsk roys Bioinformatics BioinfoCIPF GeschwindLab Indigene
  • Identification of Differentially Expressed Gene Categories in Microarray Studies Using Nonparametric Multivariate Analysis.
    Bioinformatics (27 November 2007)
    by Dan Nettleton, Justin Recknor, James M Reecy
    edited by John Quackenbush
    posted to gene_sets by heliopais on 2008-02-19 11:27:59 as read along with 3 people jyuh jfr shigepong
  • Detecting multivariate differentially expressed genes
    BMC Bioinformatics, Vol. 8 (09 May 2007), 150.
    by Roland Nilsson, Jose M Pena, Johan Bjorkegren, Jesper Tegner
    posted to gene_sets by heliopais on 2008-01-07 11:50:16 as ** along with 4 people shigepong GeeSharpMinor fmenolascina lassefolkersen
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