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di djkt expression [111 articles]

Articoli aggiunti di recente alla biblioteca di djkt classificati sotto il tag expression. You can also see everyone's expression.
  • Considering dependence among genes and markers for false discovery control in eQTL mapping.
    Bioinformatics (Oxford, England) (17 July 2008)
    by Liang Chen, Tiejun Tong, Hongyu Zhao
    posted to qtl mtp expression by djkt on 2008-09-05 19:01:47 as ** along with 2 people jyuh orzenil
  • The impact of microRNAs on protein output
    Nature (30 July 2008)
    by Daehyun Baek, Judit Villã©n, Chanseok Shin, Fernando D Camargo, Steven P Gygi, David P Bartel
    posted to rna expression by djkt on 2008-09-04 17:10:57 as ** along with 10 people giovenko mtagaya megraw brianb emptyhb erel10 maralena ajaymalik caizhiqiang gdb
  • Genomic analysis of the relationship between gene expression variation and DNA polymorphism in Drosophila simulans
    Genome Biology, Vol. 9, No. 8. (2008)
    by Mara Lawniczak, Alisha Holloway, David Begun, Corbin Jones
    posted to expression fly popgen variation by djkt on 2008-08-18 21:15:41 as ** along with 3 people and 1 group APRegier caseybrown cisevol cis-regulatory-evolution
  • Selective Constraints in Experimentally Defined Primate Regulatory Regions
    PLoS Genet, Vol. 4, No. 8. (2008), e1000157.
    by Daniel J Gaffney, Ran Blekhman, Jacek Majewski
    posted to annotation chip-chip conservation evolution expression primates tf by djkt on 2008-08-15 17:24:04 as read along with 7 people and 2 groups alhufton bpcusack aprasad pradiptaray caseybrown maximilianh cisevol BergmanLab cis-regulatory-evolution
  • A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome
    Science (3 July 2008), 1160342.
    by Marc Sultan, Marcel H Schulz, Hugues Richard, Alon Magen, Andreas Klingenhoff, Matthias Scherf, Martin Seifert, Tatjana Borodina, Aleksey Soldatov, Dmitri Parkhomchuk, Dominic Schmidt, Sean O'Keeffe, Stefan Haas, Martin Vingron, Hans Lehrach, Marie-Laure Yaspo
    posted to expression sequencing by djkt on 2008-08-15 02:02:43 as ** along with 10 people and 1 group oelemento Ema reyez caseybrown kjglennie dh0000 GeeSharpMinor balicea ArtemPankin zwang Khavkin's lab
  • Inferring causal relationships among different histone modifications and gene expression
    posted to epigenetics expression by djkt on 2008-08-01 19:12:06 as **
  • Rapidly regulated genes are intron poor
    Trends in Genetics, Vol. 24, No. 8. (August 2008), pp. 375-378.
    by Daniel C Jeffares, Christopher J Penkett, Jürg Bähler
    posted to evolution expression intron by djkt on 2008-07-31 16:45:38 as ** along with 1 person yoonk
  • Coexpression of Linked Genes in Mammalian Genomes Is Generally Disadvantageous
    Mol Biol Evol, Vol. 25, No. 8. (1 August 2008), pp. 1555-1565.
    by Ben-Yang Liao, Jianzhi Zhang
    posted to chromosome evolution expression by djkt on 2008-07-18 21:09:16 as ** along with 3 people aprasad zwang bpcusack
  • DNA methylation and structural and functional bimodality of vertebrate promoters.
    Molecular biology and evolution, Vol. 25, No. 8. (August 2008), pp. 1602-1608.
    by N Elango, SV Yi
    posted to epigenetics evolution expression tf by djkt on 2008-07-18 21:07:58 as ** along with 1 person bpcusack
  • Evolution of Evolvability in Gene Regulatory Networks
    PLoS Comput Biol, Vol. 4, No. 7. (11 July 2008), e1000112.
    by Anton Crombach, Paulien Hogeweg
    posted to evolution expression sysbio by djkt on 2008-07-17 23:34:58 as ** along with 11 people and 1 group aramesh2 erel10 Ema jdiezperezj bootsy dlobo Stew dquest shoshin rebeccamancy Borelli GEB
  • Revealing the architecture of gene regulation: the promise of eQTL studies
    Trends in Genetics, Vol. In Press, Corrected Proof
    by Yoav Gilad, Scott A Rifkin, Jonathan K Pritchard
    posted to expression qtl by djkt on 2008-07-06 18:45:57 as ** along with 4 people caseybrown jyuh tmmurali orzenil
  • Dissecting direct reprogramming through integrative genomic analysis
    Nature (28 May 2008)
    by Tarjei S Mikkelsen, Jacob Hanna, Xiaolan Zhang, Manching Ku, Marius Wernig, Patrick Schorderet, Bradley E Bernstein, Rudolf Jaenisch, Eric S Lander, Alexander Meissner
    posted to epigenetics expression stemcells by djkt on 2008-07-02 22:32:26 as ** along with 3 people zwang jasonflannick inesdesantiago
  • Identification and analysis of ancestral hominoid transcriptome inferred from cross-species transcript and processed pseudogene comparisons
    Genome Res., Vol. 18, No. 7. (1 July 2008), pp. 1163-1170.
    by Yao-Ting Huang, Feng-Chi Chen, Chiuan-Jung Chen, Hsin-Liang Chen, Trees-Juen Chuang
    posted to duplication evolution expression primates splicing by djkt on 2008-07-01 19:27:10 as ** along with 1 person dchughes
  • Two strategies for gene regulation by promoter nucleosomes
    Genome Res. (30 April 2008), gr.076059.108.
    by Itay Tirosh, Naama Barkai
    posted to chromatin expression yeast by djkt on 2008-07-01 19:20:59 as ** along with 9 people emptyhb vega nklee roys fpattyn dchughes aalibes siebert inesdesantiago
  • Combinatorial patterns of histone acetylations and methylations in the human genome
    Nat Genet, Vol. 40, No. 7. (July 2008), pp. 897-903.
    by Zhibin Wang, Chongzhi Zang, Jeffrey A Rosenfeld, Dustin E Schones, Artem Barski, Suresh Cuddapah, Kairong Cui, Tae-Young Roh, Weiqun Peng, Michael Q Zhang, Keji Zhao
    posted to epigenetics expression human by djkt on 2008-06-27 19:58:40 as ** along with 5 people bpcusack kambiz caseybrown kengg inesdesantiago
  • Sepsid even-skipped Enhancers Are Functionally Conserved in Drosophila Despite Lack of Sequence Conservation
    PLoS Genet, Vol. 4, No. 6. (27 June 2008), e1000106.
    by Emily E Hare, Brant K Peterson, Venky N Iyer, Rudolf Meier, Michael B Eisen
    posted to evolution expression fly tf by djkt on 2008-06-27 19:47:07 as ** along with 7 people and 2 groups maximilianh Stew emptyhb stajich pradiptaray cisevol caseybrown Berkeley Mycology cis-regulatory-evolution
  • Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
    Nature (18 May 2008)
    by Brian T Wilhelm, Samuel Marguerat, Stephen Watt, Falk Schubert, Valerie Wood, Ian Goodhead, Christopher J Penkett, Jane Rogers, Jürg Bähler
    posted to expression sequencing yeast by djkt on 2008-06-25 22:00:06 as ** along with 6 people and 1 group caseybrown myourshaw jonathanjacobs GeeSharpMinor jyuh semrich Molecular Biology
  • An Evolutionarily Conserved Sexual Signature in the Primate Brain
    PLoS Genet, Vol. 4, No. 6. (20 June 2008), e1000100.
    by Björn Reinius, Peter Saetre, Jennifer A Leonard, Ran Blekhman, Roxana Merino-Martinez, Yoav Gilad, Elena Jazin
    posted to divergence expression primates by djkt on 2008-06-21 01:17:33 as ** along with 1 person kambiz
  • Proliferating Cells Express mRNAs with Shortened 3' Untranslated Regions and Fewer MicroRNA Target Sites
    Science, Vol. 320, No. 5883. (20 June 2008), pp. 1643-1647.
    by Rickard Sandberg, Joel R Neilson, Arup Sarma, Phillip A Sharp, Christopher B Burge
    posted to expression rna by djkt on 2008-06-20 16:34:08 as ** along with 7 people jfr dchughes lisa1 bootsy emptyhb faion daforerog
  • The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing
    Science (1 May 2008), 1158441.
    by Ugrappa Nagalakshmi, Zhong Wang, Karl Waern, Chong Shou, Debasish Raha, Mark Gerstein, Michael Snyder
    posted to expression sequencing yeast by djkt on 2008-06-10 22:31:03 as ** along with 14 people and 1 group urgi chad_davis stajich semrich caseybrown gjuggler Retchless biomcgary GeeSharpMinor mapplab faion bpcusack jyuh shurjo Berkeley Mycology
  • Identification of active transcriptional regulatory modules by the functional assay of DNA from nucleosome-free regions.
    Genome research (25 April 2008)
    by Mahesh Yaragatti, Claudio Basilico, Lisa Dailey
    posted to annotation epigenetics expression tf by djkt on 2008-06-03 06:25:13 as ** along with 2 people maximilianh inesdesantiago
  • Random monoallelic expression: making a choice.
    Trends in genetics : TIG (29 April 2008)
    by Christel Krueger, Ian M M Morison
    posted to epigenetics evolution expression by djkt on 2008-05-28 16:24:29 as ** along with 4 people bpcusack rschulz klo inesdesantiago
  • Endogenous siRNAs Derived from Transposons and mRNAs in Drosophila Somatic Cells
    Science, Vol. 320, No. 5879. (23 May 2008), pp. 1077-1081.
    by Megha Ghildiyal, Herve Seitz, Michael D Horwich, Chengjian Li, Tingting Du, Soohyun Lee, Jia Xu, Ellen L Kittler, Maria L Zapp, Zhiping Weng, Phillip D Zamore
    posted to expression fly rna by djkt on 2008-05-23 17:03:00 as **
  • Transcription induces strand specific mutations at the 5' end of human genes
    Genome Res. (7 May 2008), gr.076570.108.
    by Paz Polak, Peter F Arndt
    posted to bgc expression by djkt on 2008-05-13 16:50:45 as ** along with 1 person bpcusack
  • Complex genetic interactions underlying expression differences between Drosophila races: Analysis of chromosome substitutions
    Proceedings of the National Academy of Sciences (22 April 2008), 0711774105.
    by Hurng-Yi Wang, Yonggui Fu, Mary S Mcpeek, Xuemei Lu, Sergey Nuzhdin, Anlong Xu, Jian Lu, Mao-Lien Wu, Chung-I Wu
    posted to evolution expression fly qtl by djkt on 2008-04-24 17:31:11 as ** along with 3 people maximilianh brant inesdesantiago
  • Gene regulation: Repositioning tunes expression
    Nature Reviews Genetics, Vol. 9, No. 5., pp. 322-323.
    by Louisa Flintoft
    posted to evolution expression tf by djkt on 2008-04-19 04:52:41 as ** along with 1 person echinotrix
  • Gene–Environment Interaction in Yeast Gene Expression
    PLoS Biology, Vol. 6, No. 4. (1 April 2008), e83.
    by Erin N Smith, Leonid Kruglyak
    posted to expression popgen yeast by djkt on 2008-04-15 22:25:53 as **
  • A Test of the Null Model for 5' UTR Evolution Based on GC Content
    Mol Biol Evol, Vol. 25, No. 5. (1 May 2008), pp. 801-804.
    by Max Reuter, Jan Engelstadter, Pierre Fontanillas, Laurence D Hurst
    posted to bgc evolution expression by djkt on 2008-04-14 20:37:31 as ** along with 1 person emptyhb
  • Independent effects of cis- and trans-regulatory variation on gene expression in Drosophila melanogaster
    Genetics (3 February 2008), genetics.107.082032.
    by Patricia J Wittkopp, Belinda K Haerum, Andrew G Clark
    posted to expression fly popgen qtl by djkt on 2008-04-02 05:07:15 as ** along with 5 people and 3 groups brant stajich mimulus_99 dpollard caseybrown EisenLab cis-regulatory-evolution RockmanLab
  • Global Chromatin Domain Organization of the Drosophila Genome
    posted to epigenetics evolution expression fly by djkt on 2008-03-28 22:35:13 as **
  • Evolution of Eukaryotic Transcription Circuits
    Science, Vol. 319, No. 5871. (28 March 2008), pp. 1797-1799.
    by Brian B Tuch, Hao Li, Alexander D Johnson
    posted to evolution expression by djkt on 2008-03-28 16:54:41 as ** along with 2 people AbnerCYH bpcusack
  • Variations in DNA elucidate molecular networks that cause disease
    Nature (16 March 2008)
    by Yanqing Chen, Jun Zhu, Pek Y Lum, Xia Yang, Shirly Pinto, Douglas J Macneil, Chunsheng Zhang, John Lamb, Stephen Edwards, Solveig K Sieberts, Amy Leonardson, Lawrence W Castellini, Susanna Wang, Marie-France Champy, Bin Zhang, Valur Emilsson, Sudheer Doss, Anatole Ghazalpour, Steve Horvath, Thomas A Drake, Aldons J Lusis, Eric E Schadt
    posted to expression qtl rodents by djkt on 2008-03-27 16:31:23 as ** along with 12 people and 1 group raiyar lp2 jo_davies shikin caseybrown ptrobajo jyuh echinotrix natstreet sanchezbuelna jfr chrisamiller GeneGo
  • Genetics of gene expression and its effect on disease
    Nature (16 March 2008)
    by Valur Emilsson, Gudmar Thorleifsson, Bin Zhang, Amy S Leonardson, Florian Zink, Jun Zhu, Sonia Carlson, Agnar Helgason, Bragi G Walters, Steinunn Gunnarsdottir, Magali Mouy, Valgerdur Steinthorsdottir, Gudrun H Eiriksdottir, Gyda Bjornsdottir, Inga Reynisdottir, Daniel Gudbjartsson, Anna Helgadottir, Aslaug Jonasdottir, Adalbjorg Jonasdottir, Unnur Styrkarsdottir, Solveig Gretarsdottir, Kristinn P Magnusson, Hreinn Stefansson, Ragnheidur Fossdal, Kristleifur Kristjansson, Hjortur G Gislason, Tryggvi Stefansson, Bjorn G Leifsson, Unnur Thorsteinsdottir, John R Lamb, Jeffrey R Gulcher, Marc L Reitman, Augustine Kong, Eric E Schadt, Kari Stefansson
    posted to expression qtl by djkt on 2008-03-27 16:27:44 as ** along with 12 people and 1 group lp2 jo_davies shikin caseybrown ptrobajo vplagnol smbe2008 echinotrix natstreet sanchezbuelna jyuh Borelli GeneGo
  • Recruitment to the Nuclear Periphery Can Alter Expression of Genes in Human Cells
    posted to expression by djkt on 2008-03-21 18:47:52 as **
  • Dynamic Remodeling of Individual Nucleosomes Across a Eukaryotic Genome in Response to Transcriptional Perturbation
    PLoS Biology, Vol. 6, No. 3. (1 March 2008), e65.
    by Sushma Shivaswamy, Akshay Bhinge, Yongjun Zhao, Steven Jones, Martin Hirst, Vishwanath R Iyer
    posted to epigenetics expression by djkt on 2008-03-18 21:12:15 as ** along with 2 people lusk vega
  • From Classical Genetics to Quantitative Genetics to Systems Biology: Modeling Epistasis
    posted to expression qtl by djkt on 2008-03-14 21:43:43 as ** along with 1 person braingrind
  • Functional Characterization of Variations on Regulatory Motifs
    posted to expression tf variation by djkt on 2008-03-10 20:20:05 as **
  • Evolution of protein-coding genes in Drosophila
    Trends in Genetics, Vol. 24, No. 3. (March 2008), pp. 114-123.
    by Amanda M Larracuente, Timothy B Sackton, Anthony J Greenberg, Alex Wong, Nadia D Singh, David Sturgill, Yu Zhang, Brian Oliver, Andrew G Clark
    posted to evolution expression fly proteins by djkt on 2008-02-28 17:51:51 as ** along with 2 people operon gjuggler
  • Evolution of gene sequence and gene expression are not correlated in yeast
    Trends in Genetics, Vol. 24, No. 3. (March 2008), pp. 109-113.
    by Itay Tirosh, Naama Barkai
    posted to evolution expression proteins yeast by djkt on 2008-02-28 17:50:31 as ** along with 2 people gjuggler huali
  • Regulatory changes underlying expression differences within and between Drosophila species.
    Nat Genet (17 February 2008)
    by Patricia J J Wittkopp, Belinda K K Haerum, Andrew G G Clark
    posted to evolution expression fly by djkt on 2008-02-27 19:26:20 as ** along with 3 people brant mimulus_99 gjuggler
  • Identification of Motifs That Are Conserved in 12 Drosophila Species and Regulate Midline Glia vs. Neuron Expression
    Genetics, Vol. 178, No. 2. (1 February 2008), pp. 787-799.
    by Patricia Estes, Eric Fulkerson, Yi Zhang
    posted to conservation expression fly tf by djkt on 2008-02-20 19:36:06 as **
  • Subfunctionalization of Duplicated Zebrafish pax6 Genes by cis-Regulatory Divergence
    PLoS Genetics, Vol. 4, No. 2. (1 February 2008), e29.
    by Dirk A Kleinjan, Ruth M Bancewicz, Philippe Gautier, Ralf Dahm, Helia B Schonthaler, Giuseppe Damante, Anne Seawright, Ann M Hever, Patricia L Yeyati, Veronica van Heyningen, Pedro Coutinho
    posted to evolution expression pax6 by djkt on 2008-02-15 19:33:06 as **
  • Do Alu repeats shape the primate transcriptome?
    Genome Biology, Vol. 9, No. 2. (2008)
    by Araxi Urrutia, Leandro B Ocana, Laurence Hurst
    posted to epigenetics evolution expression primates by djkt on 2008-02-12 06:12:11 as ** along with 4 people and 2 groups biomcgary cisevol bpcusack dchughes cis-regulatory-evolution BergmanLab
  • Cis and trans regulatory effects contribute to natural variation in transcriptome of Drosophila melanogaster
    Mol Biol Evol (12 November 2007), msm247.
    by Anne Genissel, Lauren M Mcintyre, Marta L Wayne, Sergey V Nuzhdin
    posted to expression fly popgen by djkt on 2008-02-04 16:43:08 as ** along with 2 people mimulus_99 caseybrown
  • Differential Allelic Expression in the Human Genome: A Robust Approach to Identify Genetic and Epigenetic Cis-Acting Mechanisms Regulating Gene Expression
    PLoS Genetics, Vol. preprint, No. 2008. (1 January 2008), e6.eor.
    by David Serre, Scott Gurd, Bing Ge, Robert Sladek, Donna Sinnett, Eef Harmsen, Marina Bibikova, Eugene Chudin, David L Barker, Todd Dickinson, Jian-Bing Fan, Thomas J Hudson
    posted to expression variation by djkt on 2008-02-01 18:45:39 as **
  • Predicting expression patterns from regulatory sequence in Drosophila segmentation
    Nature (02 January 2008)
    by Eran Segal, Tali Raveh-Sadka, Mark Schroeder, Ulrich Unnerstall, Ulrike Gaul
    posted to expression fly tf by djkt on 2008-01-30 19:42:26 as ** along with 13 people dakelley tmmurali eckart_bindewald bootsy biomcgary idonaldson roys emptyhb pkharchenko meiklej jrest tresch siebert
  • Concurrent Fast and Slow Cycling of a Transcriptional Activator at an Endogenous Promoter
    Science, Vol. 319, No. 5862. (25 January 2008), pp. 466-469.
    by Tatiana S Karpova, Min J Kim, Corentin Spriet, Kip Nalley, Timothy J Stasevich, Zoulika Kherrouche, Laurent Heliot, James G Mcnally
    posted to expression tf by djkt on 2008-01-25 15:06:35 as ** along with 3 people margaritis cjeans caseybrown
  • Control of Genic DNA Methylation by a jmjC Domain-Containing Protein in Arabidopsis thaliana
    Science, Vol. 319, No. 5862. (25 January 2008), pp. 462-465.
    by Hidetoshi Saze, Akiko Shiraishi, Asuka Miura, Tetsuji Kakutani
    posted to epigenetics expression by djkt on 2008-01-25 15:05:22 as ** along with 3 people epigenetics biomcgary mclarenv
  • Evaluating the role of natural selection in the evolution of gene regulation
    Heredity, Vol. aop, No. current.
    by JC Fay, PJ Wittkopp
    posted to evolution expression review selection by djkt on 2008-01-24 21:44:12 as ** along with 4 people and 2 groups dpollard cisevol emptyhb gjuggler EisenLab cis-regulatory-evolution
  • In Silico Detection of Sequence Variations Modifying Transcriptional Regulation
    PLoS Computational Biology, Vol. 4, No. 1. (1 January 2008), e5.
    by Malin C Andersen, Pär G Engström, Stuart Lithwick, David Arenillas, Per Eriksson, Boris Lenhard, Wyeth W Wasserman, Jacob Odeberg
    posted to expression snps tf by djkt on 2008-01-19 04:55:35 as ** along with 1 person renatomilani
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