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Anni 2.0: a multipurpose text-mining tool for the life sciences

by: Rob Jelier, Martijn Schuemie, Antoine Veldhoven, Lambert Dorssers, Guido Jenster, Jan Kors
Genome Biology, Vol. 9, No. 6. (2008)


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Anni 2.0 is an online tool (http://biosemantics.org/anni/) to aid the biomedical researcher with a broad range of information needs. Anni provides an ontology-based interface to Medline and retrieves documents and associations for several classes of biomedical concepts, including genes, drugs and diseases, with established text-mining technology. In this article we illustrate Anni's usability by applying the tool to two use cases: interpretation of a set differentially expressed genes, and literature-based knowledge discovery.


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