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di balicea networks [189 articles]

Articoli aggiunti di recente alla biblioteca di balicea classificati sotto il tag networks. You can also see everyone's networks.
  • Modelling and analysis of gene regulatory networks
    Nat Rev Mol Cell Biol, Vol. 9, No. 10. (October 2008), pp. 770-780.
    by Guy Karlebach, Ron Shamir
    posted to reviews networks genome-transcriptome genome-interactome general-physiology gene-expression by balicea on 2008-09-30 21:36:42 as ** along with 7 people fgibson druvus brianb nedwards dakelley jyuh tmmurali
  • Transcriptional Control in the Segmentation Gene Network of Drosophila
    PLoS Biology, Vol. 2, No. 9. (1 September 2004), e271.
    by Mark D Schroeder, Michael Pearce, John Fak, Hongqing Fan, Ulrich Unnerstall, Eldon Emberly, Nikolaus Rajewsky, Eric D Siggia, Ulrike Gaul
    posted to animal-model gene-expression genome-transcriptome networks regulatory-cascades systems-biology by balicea on 2008-08-07 16:36:17 as ** along with 7 people and 3 groups indigoviolet dpollard adepace wrowell emptyhb dlmace pradiptaray EisenLab Cline_lab UH - Computational Biology
  • Networks, Dynamics, and the Small-World Phenomenon
    The American Journal of Sociology, Vol. 105, No. 2. (1999), pp. 493-527.
    by Duncan J Watts
    posted to adaptive-systems applied-math bio-stat complexity cultural-evolution networks reviews systems-biology by balicea on 2008-08-07 04:16:28 as ** along with 10 people and 4 groups dperkel mbliemel lyongu irinas voiklis ransombriggs shelearns craigwilson06 chibatching ganden sims_phd_cohort_2005 digital_youth ColDyn Papershare
  • Computing Knock-Out Strategies in Metabolic Networks
    Journal of Computational Biology, Vol. 15, No. 3. (2008), pp. 259-268.
    by Utz-Uwe Haus, Steffen Klamt, Tamon Stephen
    posted to metabolomics methods networks reviews by balicea on 2008-07-25 16:28:01 as ** along with 5 people and 1 group tmmurali ptrobajo jiny Borelli longoka Frontiers in Diabetes and Obesity
  • A gene network approach to modeling early neurogenesis in Drosophila.
    Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (1998), pp. 30-41.
    by G Marnellos, E Mjolsness
    posted to animal-model cell-models development gene-expression networks by balicea on 2008-07-25 16:27:10 as ** along with 1 person and 1 group dlobo GEB
  • A network-based method for target selection in metabolic networks
    Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. 1616-1622.
    by R Guimera, M Sales-Pardo, LAN Amaral
    posted to metabolomics networks systems-biology by balicea on 2008-07-25 16:21:28 as ** along with 2 people AbnerCYH jiny
  • The use of logic relationships to model colon cancer gene expression networks with mRNA microarray data.
    Journal of biomedical informatics, Vol. 41, No. 4. (August 2008), pp. 530-543.
    by X Ruan, J Wang, H Li, RE Perozzi, EF Perozzi
    posted to biological-inspired-modeling cell-models diseaseomics gene-expression gene-gene genome-interactome modeling-and-simulation networks rna by balicea on 2008-07-17 15:12:17 as ** along with 1 person jfr
  • Identification of gene interactions associated with disease from gene expression data using synergy networks
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by John Watkinson, Xiaodong Wang, Tian Zheng, Dimitris Anastassiou
    posted to bio-stat diseaseomics gene-expression gene-gene microarray networks by balicea on 2008-07-17 15:09:58 as ** along with 4 people frohike barriot smgomez jfr
  • A model of grid cells based on a twisted torus topology.
    International journal of neural systems, Vol. 17, No. 4. (August 2007), pp. 231-240.
    by A Guanella, D Kiper, P Verschure
    posted to cell-models networks neuro-connectivity neuroethology spatial-cognition by balicea on 2008-07-02 23:28:05 as ** along with 1 person sen_cheng
  • A probabilistic functional network of yeast genes.
    Science, Vol. 306, No. 5701. (26 November 2004), pp. 1555-1558.
    by I Lee, SV Date, AT Adai, EM Marcotte
    posted to animal-model applied-math bio-stat functional-genome gene-expression gene-gene networks by balicea on 2008-07-01 03:59:44 as ** along with 15 people and 3 groups csgillespie irenas lfriedl ccots balajis nuke2005 eweaver opheliav nickluscombe reidy dbgrant kintoki svdate ellakat roys dbk-lab kdl EBI-regulation
  • Resonant cell assemblies: a new approach to cognitive functions and neuronal synchrony.
    Biological research, Vol. 28, No. 1. (1995), pp. 81-95.
    by FJ Varela
    posted to cog-neuro networks neuro-coding neuro-computation neuro-connectivity neuro-consciousness neuro-sync neuro-timing time-dynamics by balicea on 2008-06-29 21:19:41 as ** along with 1 person ebalp
  • A Global Pathway Crosstalk Network
    Bioinformatics (23 April 2008), btn200.
    by Yong Li, Pankaj Agarwal, Dilip Rajagopalan
    posted to cross-talk functional-genome genotype-to-phenotype molecular-signaling networks regulatory-cascades by balicea on 2008-06-20 16:14:48 as ** along with 6 people thomaskelder maralena bootsy renatomilani AlexanderPico jyuh
  • Cascade models of synaptically stored memories.
    Neuron, Vol. 45, No. 4. (17 February 2005), pp. 599-611.
    by S Fusi, PJ Drew, LF Abbott
    posted to complexity learning-and-memory modeling-and-simulation networks neuro-chem neuro-coding neuro-computation neuro-connectivity synaptic-complexity time-dynamics by balicea on 2008-06-19 16:59:08 as ** along with 5 people tmiya erk zhenbo_cheng sen_cheng fbaroni
  • Protein networks in disease
    Genome Res., Vol. 18, No. 4. (1 April 2008), pp. 644-652.
    by Trey Ideker, Roded Sharan
    posted to diseaseomics evolutionary-proteomics genome-interactome genome-transcriptome immunity informatics networks by balicea on 2008-06-19 16:38:28 as ** along with 20 people giovenko jyuh tmmurali Borelli jwdietrich frohike bootsy nedwards roys mclarenv phoenixzxl brianb schuylrp jfr paolomarcatili gracio thomaskelder ptrobajo raiyar zwang
  • A neural network model with dopamine-like reinforcement signal that learns a spatial delayed response task
    Neuroscience, Vol. 91, No. 3. (July 1999), pp. 871-890.
    by RE Suri, W Schultz
    posted to adaptive-systems biological-inspired-modeling learning-and-memory networks neuro-chem neuro-computation neuroplasticity spatial-cognition by balicea on 2008-06-15 04:46:20 as ** along with 1 person dcoates
  • A synthetic gene network for tuning protein degradation in Saccharomyces cerevisiae
    Mol Syst Biol, Vol. 3 (31 July 2007)
    by Chris Grilly, Jesse Stricker, Wyming L Pang, Matthew R Bennett, Jeff Hasty
    posted to functional-genome gene-expression genome-interactome networks by balicea on 2008-06-12 05:03:53 as *** along with 3 people zwang kfm9876 austin
  • Dynamics of neuronal firing correlation: modulation of "effective connectivity"
    J Neurophysiol, Vol. 61, No. 5. (1 May 1989), pp. 900-917.
    by AM Aertsen, GL Gerstein, MK Habib, G Palm
    posted to brain-anatomy cog-neuro networks neuro-connectivity neuro-spike systems-biology by balicea on 2008-06-10 19:29:19 as *** along with 3 people apeyrache sam1001 dcoates
  • Computational discovery of gene modules and regulatory networks.
    Nat Biotechnol, Vol. 21, No. 11. (November 2003), pp. 1337-1342.
    by Z Bar-Joseph, GK Gerber, TI Lee, NJ Rinaldi, JY Yoo, F Robert, DB Gordon, E Fraenkel, TS Jaakkola, RA Young, DK Gifford
    posted to informatics networks regulatory-cascades by balicea on 2008-06-10 19:26:24 as ** along with 12 people and 1 group ggrot dragonrez bayesian wnpx nickluscombe koller frohike karfunkel roys dquest carlk tvdbulck EBI-regulation
  • NeAT: a toolbox for the analysis of biological networks, clusters, classes and pathways
    Nucl. Acids Res. (4 June 2008), gkn336.
    by Sylvain Brohee, Karoline Faust, Gipsi Lima-Mendez, Olivier Sand, Rekin's Janky, Gilles Vanderstocken, Yves Deville, Jacques van Helden
    posted to informatics networks systems-biology by balicea on 2008-06-05 05:30:48 as ** along with 2 people neils brianb
  • Hierarchical structure and the prediction of missing links in networks
    Nature, Vol. 453, No. 7191., pp. 98-101.
    by Aaron Clauset, Cristopher Moore, MEJ Newman
    posted to adaptive-systems applied-math bio-stat complexity networks by balicea on 2008-06-03 03:11:59 as ** along with 37 people kubyaddi pbull gtgt15 Ema jago cmor kengg jjray soramame_0518 deanmalmgren briordan hryk tny AbnerCYH cactus tmmurali akshat bryanhughes gagliol margaritis jyuh craigwilson06 cmmorel eyliu markusd elsantosneto pinney i-stevenson fbaroni nedwards apwesolowski Borelli ptrobajo dpf rds lfriedl sen_cheng
  • Graphs over time: densification laws, shrinking diameters and possible explanations
    (2005), pp. 177-187.
    by Jure Leskovec, Jon Kleinberg, Christos Faloutsos
    posted to applied-math bio-stat graph-theory networks time-dynamics by balicea on 2008-06-01 07:02:37 as ** along with 13 people and 2 groups A_Olympia ChaTo scis0000001 bigbossman griota somasanyal flavian_vasile PaulBHartzog koles mpotamias theus styliani saket Philosophy_of_Information Blog_and_Wiki_Research
  • Evolutionary dynamics on graphs
    Nature, Vol. 433, No. 7023. (20 January 2005), pp. 312-316.
    by Erez Lieberman, Christoph Hauert, Martin A Nowak
    posted to adaptive-systems complexity evo-computation evolution graph-theory networks by balicea on 2008-06-01 06:46:58 as *** along with 15 people and 4 groups qwermish mague bpb Borelli shivakumar3_14 cmm pbellec kehan zono jaspervoskuilen timflutre marcusfrean tomrevilla saket davidchavalarias biodiversity_conservation Bioinformatics FAB-lab GrassBase
  • Associative recognition and storage in a model network of physiological Neurons
    Biol. Cybern., Vol. 54, No. 4-5. (1986), pp. 319-336.
    by J Buhmann, K Schulten
    posted to adaptive-systems applied-math learning-and-memory networks neuro-coding neuro-computation neuro-spike by balicea on 2008-05-31 18:41:29 as *** along with 1 person dcoates
  • Simple models for reading neuronal population codes.
    Proc Natl Acad Sci U S A, Vol. 90, No. 22. (15 November 1993), pp. 10749-10753.
    by HS Seung, H Sompolinsky
    posted to brain-machine-interface information-theory networks neuro-coding sensory-systems by balicea on 2008-05-30 17:41:27 as **** along with 2 people jagged_arrow dcoates
  • Reactivation of hippocampal ensemble memories during sleep.
    Science, Vol. 265, No. 5172. (29 July 1994), pp. 676-679.
    by MA Wilson, BL McNaughton
    posted to animal-model learning-and-memory networks neuroethology neuroplasticity sleep spatial-cognition virtual-environment by balicea on 2008-05-30 08:13:36 as *** along with 7 people and 1 group klouie thomas_wills apeyrache Lyngbya napvasconcelos onphene sen_cheng Glimcher_Lab
  • Response delays and the structure of transcription networks.
    J Mol Biol, Vol. 329, No. 4. (13 June 2003), pp. 645-654.
    by N Rosenfeld, U Alon
    posted to gene-gene graph-theory networks systems-biology by balicea on 2008-05-28 19:19:14 as *** along with 1 person madhadron
  • An Input-Representing Interneuron Regulates Spike Timing and Thereby Phase Switching in a Motor Network
    J. Neurosci., Vol. 28, No. 8. (20 February 2008), pp. 1916-1928.
    by Kosei Sasaki, Jian Jing, Michael R Due, Klaudiusz R Weiss
    posted to movement-science networks neuro-coding neuro-computation neuro-connectivity neuroethology neuro-spike neuro-timing switching-examples by balicea on 2008-05-28 19:16:35 as ** along with 2 people fbaroni sen_cheng
  • Random graph models of social networks.
    Proc Natl Acad Sci U S A, Vol. 99 Suppl 1 (19 February 2002), pp. 2566-2572.
    by ME Newman, DJ Watts, SH Strogatz
    posted to cultural-evolution graph-theory networks by balicea on 2008-04-21 19:40:41 as ** along with 8 people pdlug anon_pl cristinaalp merazzle jaspervoskuilen mylit ransombriggs patrickhoefler
  • A Primer on Learning in Bayesian Networks for Computational Biology
    PLoS Computational Biology, Vol. 3, No. 8. (1 August 2007), e129.
    by Chris J Needham, James R Bradford, Andrew J Bulpitt, David R Westhead
    posted to genome-association learning-and-memory networks by balicea on 2008-03-28 17:11:53 as ** along with 11 people and 2 groups jyuh brian jfr grahamc zwang bertelsen cabbagezs groepl ppark idonaldson isimpson Bioinformatics BergmanLab
  • Models and properties of power-law adaptation in neural systems.
    J Neurophysiol, Vol. 96, No. 2. (August 2006), pp. 826-833.
    by PJ Drew, LF Abbott
    posted to adaptive-systems biological-inspired-modeling complexity networks neuro-computation neuro-connectivity by balicea on 2008-02-18 04:25:09 as *** along with 6 people and 1 group awooga jagged_arrow suizan zhihui42 gdw2104 apeyrache 801
  • Structure and function of the feed-forward loop network motif.
    Proc Natl Acad Sci U S A, Vol. 100, No. 21. (14 October 2003), pp. 11980-11985.
    by S Mangan, U Alon
    posted to adaptive-systems biological-inspired-modeling control-theory networks regulatory-cascades robustness systems-biology by balicea on 2008-02-18 02:37:22 as *** along with 12 people and 3 groups camster rklancer korakot zqshen jstajic jjray alexg ddahlem jtaylor gcalda marck hannahrajasingh Philosophy_of_Information dbk-lab Blog_and_Wiki_Research
  • A single gene network accurately predicts phenotypic effects of gene perturbation in Caenorhabditis elegans
    Nature Genetics, Vol. 40, No. 2. (27 January 2008), pp. 181-188.
    by Insuk Lee, Ben Lehner, Catriona Crombie, Wendy Wong, Andrew G Fraser, Edward M Marcotte
    posted to animal-model evolutionary-genomics genotype-to-phenotype methods networks by balicea on 2008-02-01 18:41:20 as *** along with 9 people and 1 group tharris jyuh tmmurali capitall roys jiny kintoki meiklej jfr C. elegans / WormBase
  • Measuring and extracting proximity in networks
    (2006), pp. 245-255.
    by Yehuda Koren, Stephen C North, Chris Volinsky
    posted to complexity graph-theory informatics networks by balicea on 2008-01-29 15:52:57 as *** along with 2 people xiaoyan2006 RafG
  • Petri nets: Properties, analysis and applications
    Proceedings of the IEEE, Vol. 77, No. 4. (1989), pp. 541-580.
    by T Murata
    posted to adaptive-systems complexity modeling-and-simulation networks reviews by balicea on 2008-01-22 19:46:24 as *** along with 8 people and 2 groups tautologico kayani ddahlem mattjb mhakami aless samsalisbury abellogin ComplexAdaptiveSystems DSTO-CAS
  • High-confidence prediction of global interactomes based on genome-wide coevolutionary networks
    Proceedings of the National Academy of Sciences (16 January 2008), 0709671105.
    by David Juan, Florencio Pazos, Alfonso Valencia
    posted to coevolution evolutionary-genomics genome-interactome informatics networks systems-biology whole-genomic by balicea on 2008-01-22 19:41:32 as *** along with 12 people and 1 group tmmurali brant sebastien_vigneau bluto cjeans aconesa Katje roys friendpine huali mdstobbe paolomarcatili microbiology_nijmegen
  • Survivin, cancer networks and pathway-directed drug discovery
    Nature Reviews Cancer, Vol. 8, No. 1., pp. 61-70.
    by Dario C Altieri
    posted to diseaseomics molecular-signaling networks regulatory-cascades systems-biology by balicea on 2008-01-22 17:08:19 as *** along with 4 people jyuh cjeans jdiezperezj renatomilani
  • An integrative genomics approach to the reconstruction of gene networks in segregating populations.
    Cytogenet Genome Res, Vol. 105, No. 2-4. (2004), pp. 363-374.
    by J Zhu, PY Lum, J Lamb, D GuhaThakurta, SW Edwards, R Thieringer, JP Berger, MS Wu, J Thompson, AB Sachs, EE Schadt
    posted to genome-association genome-structure genotype-to-phenotype heredity networks systems-biology by balicea on 2008-01-20 23:03:59 as *** along with 3 people maryee brant jo_davies
  • Four correlates of complex behavioral networks: Differentiation, behavior, connectivity, and compartmentalization: Carving networks at their joints
    Complexity, Vol. 10, No. 6. (2005), pp. 13-40.
    by Mark A Changizi, Darren He
    posted to adaptive-systems behavior complexity networks neuro-connectivity by balicea on 2008-01-18 06:21:01 as *** along with 2 people and 1 group brettc josepe evo-devo
  • Computational analysis of human protein interaction networks.
    Proteomics, Vol. 7, No. 15. (August 2007), pp. 2541-2552.
    by F Ramírez, A Schlicker, Y Assenov, T Lengauer, M Albrecht
    posted to evolutionary-proteomics gene-gene genome-structure genotype-to-phenotype networks by balicea on 2008-01-18 03:56:51 as *** along with 4 people jyuh grahamc paolomarcatili carlk
  • Integrated approaches to uncovering transcription regulatory networks in mammalian cells.
    Genomics (7 January 2008)
    by Kai Tan, Jesper Tegner, Timothy Ravasi
    posted to animal-model gene-expression gene-gene genotype-to-phenotype graph-theory networks systems-biology by balicea on 2008-01-18 03:54:40 as *** along with 3 people jyuh lp2 brant
  • Emergence of Scaling in Random Networks
    Science, Vol. 286, No. 5439. (15 October 1999), pp. 509-512.
    by Albert-László Barabási, Réka Albert
    posted to adaptive-systems applied-math complexity graph-theory networks by balicea on 2008-01-16 17:35:03 as *** along with 22 people nolodie qwermish dragonrez shivaram tolosoft ddahlem merazzle Borelli muraken lshaw gurkanbebek jaspervoskuilen rcrane ransombriggs idreams2 nkishan justforscraps Evangelia kb Diego_Prada subhacom ethkim
  • Functional MRI reveals the existence of modality and coordination-dependent timing networks.
    Neuroimage, Vol. 25, No. 4. (1 May 2005), pp. 1031-1042.
    by KJ Jantzen, FL Steinberg, JA Kelso
    posted to brain-anatomy movement-science networks neuro-connectivity neuro-disorders neuro-tech neuro-timing time-course time-dynamics by balicea on 2008-01-15 19:37:49 as *** along with 1 person JohnSchlerf
  • A complex oscillating network of signaling genes underlies the mouse segmentation clock.
    Science, Vol. 314, No. 5805. (8 December 2006), pp. 1595-1598.
    by ML Dequéant, E Glynn, K Gaudenz, M Wahl, J Chen, A Mushegian, O Pourquié
    posted to biological-rhythms evo-devo gene-expression molecular-signaling morphogenesis networks regulatory-cascades by balicea on 2008-01-14 19:18:40 as *** along with 3 people and 1 group brant ghattem maralena EisenLab
  • The brainweb: phase synchronization and large-scale integration.
    Nat Rev Neurosci, Vol. 2, No. 4. (April 2001), pp. 229-239.
    by F Varela, JP Lachaux, E Rodriguez, J Martinerie
    posted to adaptive-systems brain-anatomy networks neuro-connectivity neuro-evolution real-time-monitoring by balicea on 2008-01-14 18:59:39 as *** along with 8 people pgastrein pbellec awooga kperdue tnkysr dimatura shoshin ebalp
  • STITCH: interaction networks of chemicals and proteins.
    Nucleic Acids Res (15 December 2007)
    by Michael Kuhn, Christian von Mering, Monica Campillos, Lars Juhl J Jensen, Peer Bork
    posted to evolutionary-proteomics informatics networks systems-biology by balicea on 2008-01-13 20:10:34 as *** along with 6 people and 1 group jyuh massivemayhem bootsy sobolevnrm larsjuhljensen higueruelo baker-group
  • A more complete, complexed and structured interactome.
    Curr Opin Struct Biol (14 June 2007)
    by Damien Devos, Robert B B Russell
    posted to complexity evolutionary-genomics evolutionary-proteomics gene-gene genome-structure genotype-to-phenotype networks systems-biology by balicea on 2008-01-13 19:36:36 as *** along with 4 people chad_davis skhadar choonpeng ruvido
  • Shaping the future of interactome networks
    Genome Biology, Vol. 8 (01 November 2007), 316.
    by Patrick Aloy
    posted to evolution evolutionary-genomics evolutionary-proteomics gene-gene genotype-to-phenotype molecular-signaling networks regulatory-cascades systems-biology by balicea on 2008-01-13 19:34:35 as *** along with 1 person ruvido
  • Functional connectivity estimation in fMRI data: Influence of preprocessing and time course selection.
    Hum Brain Mapp (12 October 2007)
    by Maria Gavrilescu, Geoffrey W W Stuart, Susan Rossell, Katherine Henshall, Colette McKay, Alex A A Sergejew, David Copolov, Gary F F Egan
    posted to cog-neuro networks neuro-computation neuro-connectivity neuro-tech time-course by balicea on 2008-01-11 05:01:00 as *** along with 8 people and 1 group athleem pbellec xinian adick kaniko elv liangwang isami resting-state_networks
  • Transcranial magnetic stimulation, causal structure-function mapping and networks of functional relevance.
    Curr Opin Neurobiol, Vol. 16, No. 5. (October 2006), pp. 593-599.
    by AT Sack
    posted to networks neuro-computation neuro-connectivity neuro-tech reviews time-course by balicea on 2008-01-11 04:59:32 as *** along with 1 person mshafi64
  • A default mode of brain function: A brief history of an evolving idea.
    Neuroimage, Vol. 37, No. 4. (1 October 2007), pp. 1083-1090.
    by Marcus E E Raichle, Abraham Z Z Snyder
    posted to brain-anatomy cog-neuro networks neuro-coding neuro-computation neuro-connectivity by balicea on 2008-01-11 04:42:13 as *** along with 7 people and 1 group pbellec xinian ITra adick suizan bdhont mbolding resting-state_networks
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