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Tag wga [61 articles]

Articoli recentemente classificati sotto il tag wga.
  • Unbiased Whole-Genome Amplification Directly From Clinical Samples
    Genome Res., Vol. 13, No. 5. (1 May 2003), pp. 954-964.
    by Seiyu Hosono, Fawad A Faruqi, Frank B Dean, Yuefen Du, Zhenyu Sun, Xiaohong Wu, Jing Du, Stephen F Kingsmore, Michael Egholm, Roger S Lasken
  • Multiple displacement amplification as a pre-polymerase chain reaction (pre-PCR) to process difficult to amplify samples and low copy number sequences from natural environments
    Environmental Microbiology, Vol. 7, No. 7. (July 2005), pp. 1024-1028.
    by Juan M Gonzalez, Carmen C Portillo, Cesareo Saiz-Jimenez
  • Targeted Access to the Genomes of Low-Abundance Organisms in Complex Microbial Communities
    Appl. Environ. Microbiol., Vol. 73, No. 10. (15 May 2007), pp. 3205-3214.
    by Mircea Podar, Carl B Abulencia, Marion Walcher, Don Hutchison, Karsten Zengler, Joseph A Garcia, Trevin Holland, David Cotton, Loren Hauser, Martin Keller
  • Fluorescence in situ hybridization-flow cytometry-cell sorting-based method for separation and enrichment of type I and type II methanotroph populations.
    Applied and environmental microbiology, Vol. 72, No. 6. (June 2006), pp. 4293-4301.
  • Complete genome of the uncultured Termite Group 1 bacteria in a single host protist cell
    Proceedings of the National Academy of Sciences, Vol. 105, No. 14. (8 April 2008), pp. 5555-5560.
    by Yuichi Hongoh, Vineet K Sharma, Tulika Prakash, Satoko Noda, Todd D Taylor, Toshiaki Kudo, Yoshiyuki Sakaki, Atsushi Toyoda, Masahira Hattori, Moriya Ohkuma
  • PLINK: a tool set for whole-genome association and population-based linkage analyses.
    American journal of human genetics, Vol. 81, No. 3. (September 2007), pp. 559-575.
    by S Purcell, B Neale, K Todd-Brown, L Thomas, MA Ferreira, D Bender, J Maller, P Sklar, PI de Bakker, MJ Daly, PC Sham
  • The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing
    Science (1 May 2008), 1158441.
    by Ugrappa Nagalakshmi, Zhong Wang, Karl Waern, Chong Shou, Debasish Raha, Mark Gerstein, Michael Snyder
  • RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
    Genome Res. (11 June 2008), gr.079558.108.
    by John Marioni, Cristopher Mason, Shrikant Mane, Matthew Stephens, Yoav Gilad
  • Mapping and quantifying mammalian transcriptomes by RNA-Seq.
    Nature methods (30 May 2008)
    by Ali Mortazavi, Brian A A Williams, Kenneth McCue, Lorian Schaeffer, Barbara Wold
  • GWAsimulator: a rapid whole-genome simulation program
    Bioinformatics, Vol. 24, No. 1. (1 January 2008), pp. 140-142.
    by Chun Li, Mingyao Li
  • New links to the pathogenesis of Crohn disease provided by genome-wide association scans
    Nature Reviews Genetics, Vol. 9, No. 1., pp. 9-14.
    by Christopher G Mathew
  • Large-scale SNP analysis reveals clustered and continuous patterns of human genetic variation.
    Hum Genomics, Vol. 2, No. 2. (2005), pp. 81-89.
    by Mark D Shriver, Rui Mei, Esteban J Parra, Vibhor Sonpar, Indrani Halder, Sarah A Tishkoff, Theodore G Schurr, Sergev I Zhadanov, Ludmila P Osipova, Tom D Brutsaert, Jonathan Friedlaender, Lynn B Jorde, WS Watkins, Michael J Bamshad, Gerardo Gutierrez, Halina Loi, Hajime Matsuzaki, Rick A Kittles, George Argyropoulos, Jose R Fernandez, Joshua M Akey, Keith W Jones
  • Prediction of individual genetic risk to disease from genome-wide association studies.
    Genome Res, Vol. 17, No. 10. (October 2007), pp. 1520-1528.
    by NR Wray, ME Goddard, PM Visscher
  • Buccal Swabs and Treated Cards: Methodological Considerations for Molecular Epidemiologic Studies Examining Pediatric Populations.
    Am J Epidemiol (7 March 2008)
    by Sara M M Beckett, Stephen J J Laughton, Luciano Dalla D Pozza, Geoffrey B B McCowage, Glenn Marshall, Richard J J Cohn, Elizabeth Milne, Lesley J J Ashton
    posted to fta wga by RGomaa on 2008-03-31 11:07:35 as **
  • Wheat germ agglutinin specifically inhibits formyl peptide-induced polymorphonuclear leukocyte chemotaxis.
    J Immunol, Vol. 129, No. 6. (December 1982), pp. 2718-2724.
    by HD Perez, R Ong, K Khanna, D Banda, IM Goldstein
  • Cell-free cloning using phi29 DNA polymerase.
    Proc Natl Acad Sci U S A, Vol. 102, No. 48. (29 November 2005), pp. 17332-17336.
    by CA Hutchison, HO Smith, C Pfannkoch, JC Venter
  • Environmental Whole-Genome Amplification To Access Microbial Populations in Contaminated Sediments
    Appl. Environ. Microbiol., Vol. 72, No. 5. (1 May 2006), pp. 3291-3301.
    by Carl B Abulencia, Denise L Wyborski, Joseph A Garcia, Mircea Podar, Wenqiong Chen, Sherman H Chang, Hwai W Chang, David Watson, Eoin L Brodie, Terry C Hazen, Martin Keller
    posted to sediments wga by mcox on 2008-05-12 17:10:26 as ** along with 2 people Olaf_Ilzins vrich
  • Assessment of whole genome amplification-induced bias through high-throughput, massively parallel whole genome sequencing
    BMC Genomics, Vol. 7 (23 August 2006), 216.
    by Robert Pinard, Alex de Winter, Gary J Sarkis, Mark B Gerstein, Karrie R Tartaro, Ramona N Plant, Michael Egholm, Jonathan M Rothberg, John H Leamon
    posted to methods pcr wga by mcox on 2008-05-13 21:30:51 as ** along with 3 people jmeppley rabu bozdagd
  • Usefulness of repeated GenomiPhi, a phi29 DNA polymerase-based rolling circle amplification kit, for generation of large amounts of plasmid DNA.
    Biomolecular engineering, Vol. 22, No. 4. (October 2005), pp. 129-132.
    by M Sato, M Ohtsuka, Y Ohmi
    posted to methods pcr wga by mcox on 2008-05-13 21:34:52 as **
  • A procedure for highly specific, sensitive, and unbiased whole-genome amplification
    Proceedings of the National Academy of Sciences, Vol. 105, No. 40. (7 October 2008), pp. 15499-15504.
    by Xinghua Pan, Alexander E Urban, Dean Palejev, Vincent Schulz, Fabian Grubert, Yiping Hu, Michael Snyder, Sherman M Weissman
    posted to wga by Katje on 2008-10-08 11:15:33 as **
  • Performance of Whole-Genome Amplified DNA Isolated from Serum and Plasma on High-Density Single Nucleotide Polymorphism Arrays
    J Mol Diagn, Vol. 10, No. 3. (1 May 2008), pp. 249-257.
    by Daniel T Croft, Rick M Jordan, Heather L Patney, Craig D Shriver, Marina N Vernalis, Trevor J Orchard, Darrell L Ellsworth
    posted to wga blood microarray snp by jyuh on 2008-05-14 10:27:15 as **
  • GenomePlex Whole-Genome Amplification
    Cold Spring Harbor Protocols, Vol. 2008, No. 2. (1 January 2008), pdb.prot4920.
    by Nona Arneson, Simon Hughes, Richard Houlston, Susan Done
    posted to wga by jyuh on 2008-07-17 10:00:03 as **
  • LINKGEN: a new algorithm to process data in genetic linkage studies.
    Genomics, Vol. 91, No. 6. (June 2008), pp. 544-547.
    posted to software wga by jyuh on 2008-07-25 15:35:51 as **
  • Improved multiple displacement amplification with phi29 DNA polymerase for genotyping of single human cells.
    BioTechniques, Vol. 44, No. 7. (June 2008), pp. 879-890.
    by G Kumar, E Garnova, M Reagin, A Vidali
    posted to microarray single-cell wga by jyuh on 2008-07-18 13:54:24 as **
  • Whole-Genome Amplification by Degenerate Oligonucleotide Primed PCR (DOP-PCR)
    Cold Spring Harbor Protocols, Vol. 2008, No. 2. (1 January 2008), pdb.prot4919.
    by Nona Arneson, Simon Hughes, Richard Houlston, Susan Done
    posted to pcr wga by jyuh on 2008-07-17 10:02:30 as **
  • Impact of whole genome amplification on analysis of copy number variants.
    Nucleic acids research, Vol. 36, No. 13. (August 2008)
    by TJ Pugh, AD Delaney, N Farnoud, S Flibotte, M Griffith, HI Li, H Qian, P Farinha, RD Gascoyne, MA Marra
    posted to cnv wga by jyuh on 2008-08-10 07:24:23 as ** along with 2 people and 1 group stajich nuin Berkeley Mycology
  • SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries.
    Nat Methods (24 February 2008)
    by Curtis P P Van Tassell, Timothy P L P Smith, Lakshmi K K Matukumalli, Jeremy F F Taylor, Robert D D Schnabel, Cynthia Taylor T Lawley, Christian D D Haudenschild, Stephen S S Moore, Wesley C C Warren, Tad S S Sonstegard
    posted to extraction sequencing snp wga by jyuh on 2008-05-12 16:36:25 as ** along with 2 people orzenil lpanunzi
  • Whole-Genome Amplification by Improved Primer Extension Preamplification PCR (I-PEP-PCR)
    Cold Spring Harbor Protocols, Vol. 2008, No. 2. (1 January 2008), pdb.prot4921.
    by Nona Arneson, Simon Hughes, Richard Houlston, Susan Done
    posted to pcr wga by jyuh on 2008-07-17 10:06:21 as **
  • Whole genome–amplified DNA: insights and imputation
    Nature Methods, Vol. 5, No. 4., pp. 279-280.
    by Yik Y Teo, Michael Inouye, Kerrin S Small, Andrew E Fry, Simon C Potter, Sarah J Dunstan, Mark Seielstad, Inês Barroso, Nicholas J Wareham, Kirk A Rockett, Dominic P Kwiatkowski, Panos Deloukas
    posted to wga by jyuh on 2008-05-12 16:37:03 as ** along with 1 person GeeSharpMinor
  • Multiplex amplification of all coding sequences within 10 cancer genes by Gene-Collector.
    Nucleic Acids Res, Vol. 35, No. 7. (2007)
    by S Fredriksson, J Banér, F Dahl, A Chu, H Ji, K Welch, RW Davis
    posted to cancer snp wga by jyuh on 2007-07-12 04:47:15 as **
  • Performance of Amplified DNA in an Illumina GoldenGate BeadArray Assay.
    Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, Vol. 17, No. 7. (July 2008), pp. 1781-1789.
    posted to gwa illumina wga by jyuh on 2008-07-25 07:26:58 as **
  • Correction of population stratification in large multi-ethnic association studies.
    PLoS ONE, Vol. 3, No. 1. (2008)
    by D Serre, A Montpetit, G Paré, JC Engert, S Yusuf, B Keavney, TJ Hudson, S Anand
    posted to stratification wga by jyuh on 2008-07-25 07:41:13 as **
  • Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering.
    American journal of human genetics, Vol. 81, No. 5. (November 2007), pp. 1084-1097.
    by SR Browning, BL Browning
    posted to haplotype missing software wga by jyuh on 2008-07-25 05:43:12 as **
  • Multiplex amplification of large sets of human exons
    Nature Methods, Vol. 4, No. 11. (14 October 2007), pp. 931-936.
    by Gregory J Porreca, Kun Zhang, Jin B Li, Bin Xie, Derek Austin, Sara L Vassallo, Emily M Leproust, Bill J Peck, Christopher J Emig, Fredrik Dahl, Yuan Gao, George M Church, Jay Shendure
    posted to wga sequencing by jyuh on 2007-11-02 02:53:28 as ** along with 2 people balicea caseybrown
  • Toward the human genotope.
    Bulletin of mathematical biology, Vol. 69, No. 8. (November 2007), pp. 2723-2735.
    posted to wga by jyuh on 2008-07-25 06:07:09 as **
  • Optimization of minuscule samples for use with cDNA microarrays.
    J Biochem Biophys Methods (23 December 2007)
    by Susan McLean M Hunter, Fiona C C Mansergh, Martin J J Evans
    posted to microarray wga by jyuh on 2008-03-05 07:00:43 as ** along with 1 person vrich
  • Whole-Genome Amplification by Adaptor-Ligation PCR of Randomly Sheared Genomic DNA (PRSG)
    Cold Spring Harbor Protocols, Vol. 2008, No. 2. (1 January 2008), pdb.prot4922.
    by Nona Arneson, Simon Hughes, Richard Houlston, Susan Done
    posted to pcr wga by jyuh on 2008-07-17 10:05:18 as ** along with 1 person genetist
  • Whole genome amplification using single-primer PCR.
    Biotechnology journal, Vol. 3, No. 3. (March 2008), pp. 378-382.
    by K Lao, NL Xu, NA Straus
    posted to pcr wga by jyuh on 2008-07-17 09:25:52 as **
  • Reliability of high-throughput genotyping of whole genome amplified DNA in SNP genotyping studies.
    Electrophoresis, Vol. 28, No. 16. (August 2007), pp. 2812-2817.
    posted to method snp wga by jyuh on 2007-10-30 02:16:27 as **
  • A comprehensive assay for targeted multiplex amplification of human DNA sequences.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 27. (8 July 2008), pp. 9296-9301.
    by Sujatha Krishnakumar, Jianbiao Zheng, Julie Wilhelmy, Malek Faham, Michael Mindrinos, Ronald Davis
    posted to sequencing snp wga by jyuh on 2008-07-16 15:27:48 as **
  • Impaired performance of FDR-based strategies in whole-genome association studies when SNPs are excluded prior to the analysis.
    Genetic epidemiology (10 July 2008)
    by Gaëlle Marenne, Cyril Dalmasso, Hervé Perdry, Emmanuelle Génin, Philippe Broët
    posted to fdr wga by jyuh on 2008-07-24 17:18:14 as **
  • Efficient multilocus association testing for whole genome association studies using localized haplotype clustering.
    Genetic epidemiology, Vol. 31, No. 5. (July 2007), pp. 365-375.
    by BL Browning, SR Browning
    posted to haplotype software wga by jyuh on 2008-07-25 05:30:49 as **
  • Improved RNA quality and TaqMan(R) Pre-amplification method (PreAmp) to enhance expression analysis from formalin fixed paraffin embedded (FFPE) materials
    BMC Biotechnology, Vol. 8 (06 February 2008), 10.
    by Jinghuan Li, Paul Smyth, Susanne Cahill, Karen Denning, Richard Flavin, Sinead Aherne, Marco Pirotta, Simone M Guenther, John J O'Leary, Orla Sheils
    posted to company ffpe microarray pcr wga by jyuh on 2008-05-01 10:56:38 as ** along with 1 person jfr
  • Enrichment of super-sized resequencing targets from the human genome
    Nature Methods, Vol. 4, No. 11., pp. 891-892.
    by Maynard Olson
    posted to wga sequencing by jyuh on 2008-05-12 16:41:22 as **
  • Expression profiling with RNA from formalin-fixed, paraffin-embedded material.
    BMC medical genomics, Vol. 1 (2008)
    posted to company ffpe microarray wga by jyuh on 2008-05-01 10:52:34 as ** along with 1 person jfr
  • Multiplex preamplification of specific cDNA targets prior to gene expression analysis by TaqMan Arrays.
    BMC research notes, Vol. 1, No. 1. (2008)
    by Lourdes Mengual, Moisès Burset, Mercedes Marín-Aguilera, María J Ribal, Antonio Alcaraz
    posted to company pcr wga by jyuh on 2008-08-25 04:10:03 as **
  • Successful amplification of degraded DNA for use with high-throughput SNP genotyping platforms.
    Human mutation (12 June 2008)
    by Simon Mead, Mark Poulter, John Beck, James Uphill, Chris Jones, Cheng Eng E Ang, Charles A A Mein, John Collinge
    posted to ffpe gwa microaray snp wga by jyuh on 2008-07-16 13:45:40 as **
  • Multigene amplification and massively parallel sequencing for cancer mutation discovery.
    Proc Natl Acad Sci U S A, Vol. 104, No. 22. (29 May 2007), pp. 9387-9392.
    by F Dahl, J Stenberg, S Fredriksson, K Welch, M Zhang, M Nilsson, D Bicknell, WF Bodmer, RW Davis, H Ji
    posted to cancer sequencing wga by jyuh on 2007-07-12 01:57:20 as **
  • Exon-Level Expression Profiling: A Comprehensive Transcriptome Analysis of Oral Fluids
    Clin Chem, Vol. 54, No. 5. (1 May 2008), pp. 824-832.
    by Zhanzhi Hu, Bernhard G Zimmermann, Hui Zhou, Jianghua Wang, Bradley S Henson, Weixia Yu, David Elashoff, Guido Krupp, David T Wong
    posted to wga saliva microarray affy by jyuh on 2008-05-01 03:30:20 as **
  • MegaPlex PCR: a strategy for multiplex amplification
    Nature Methods, Vol. 4, No. 10. (16 September 2007), pp. 835-837.
    by Linda S Meuzelaar, Owen Lancaster, Paul J Pasche, Guido Kopal, Anthony J Brookes
    posted to multiplex pcr primer snp wga by jyuh on 2007-10-30 02:18:41 as **
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