Registrati | Log in | FAQ      [?] 
Recent | Recommended | Search | Authors | Tags | Export

Group: EisenLab - with tag yeast [26 articles]

Recent papers posted by members of the EisenLab group with tag yeast
  • Use of an evolutionary model to provide evidence for a wide heterogeneity of required affinities between transcription factors and their binding sites in yeast.
    Pac Symp Biocomput (2008), pp. 489-500.
    by RW Lusk, MB Eisen
    posted to affinity binding_site transcription_factor variation yeast by dpollard to the group EisenLab on 2008-02-01 06:19:09 as read along with 1 person and 1 group maximilianh cis-regulatory-evolution
  • Transcriptional regulatory code of a eukaryotic genome
    Nature, Vol. 431, No. 7004. (2004), pp. 99-104.
    by Christopher T Harbison, Benjamin D Gordon, Tong I Lee, Nicola J Rinaldi, Kenzie D Macisaac, Timothy W Danford, Nancy M Hannett, Jean-Bosco Tagne, David B Reynolds, Jane Yoo, Ezra G Jennings, Julia Zeitlinger, Dmitry K Pokholok, Manolis Kellis, Alex P Rolfe, Ken T Takusagawa, Eric S Lander, David K Gifford, Ernest Fraenkel, Richard A Young
    posted to chip_chip cis_regulatory_elements yeast by dpollard to the group EisenLab on 2007-12-04 00:29:15 as read along with 22 people and 7 groups kristallreiner mariakmejia brant alokm tuck chad_davis lyongu kaspermunch balicea kt dchughes nirfriedman cmm nickluscombe kengg gespim koller lusk nklee cisevol njcitulike xili03 Bioinformatics FAB-lab G4ID EBI-regulation Plantandetc Genetics-of-Gambling BergmanLab
  • Accurate gene-tree reconstruction by learning gene- and species-specific substitution rates across multiple complete genomes
    Genome Res. (7 November 2007), gr.7105007.
    by Matthew D Rasmussen, Manolis Kellis
    posted to drosophila method phylogeny prediction yeast by dpollard to the group EisenLab on 2007-11-21 02:56:16 as read along with 2 people stajich caseybrown
  • Interaction of Gal repressor with inducer and operator: induction of gal transcription from repressor-bound DNA.
    Proc Natl Acad Sci U S A, Vol. 94, No. 7. (1 April 1997), pp. 2957-2962.
    by S Chatterjee, YN Zhou, S Roy, S Adhya
    posted to binding_site cis_regulatory_elements grammar steric_repression yeast by dpollard to the group EisenLab on 2007-10-31 21:26:00 as **
  • Gene duplication and the adaptive evolution of a classic genetic switch
    Nature, Vol. 449, No. 7163. (11 October 2007), pp. 677-681.
    by Chris T Hittinger, Sean B Carroll
    posted to adaptive_conflict duplication_degeneration_complementation eisen_journal_club in-depth regulatory_sequence_evolution yeast by dpollard to the group EisenLab on 2007-10-19 20:13:02 as read along with 8 people and 1 group clearbluespring skumagai mcphee dchughes djkt biomcgary blobbybirdman kjlipin cis-regulatory-evolution
  • The Role of Cis-Regulatory Motifs and Genetical Control of Expression in the Divergence of Yeast Duplicate Genes.
    Mol Biol Evol (10 September 2007)
    by Lindsey J J Leach, Ze Zhang, Chenqi Q Q Lu, Michael J J Kearsey, Zewei W W Luo
    posted to yeast eqtl by brant to the group EisenLab on 2007-09-18 17:11:22 as ** along with 1 person and 1 group cisevol cis-regulatory-evolution
  • Transcription factor concentrations versus binding site affinities in the yeast S. cerevisiae.
    Phys Biol, Vol. 4, No. 2. (June 2007), pp. 134-143.
    by E Aurell, AF d'Hérouël, C Malmnäs, M Vergassola
    posted to yeast transcription_factor dna_binding_affinity by cwbrown to the group EisenLab on 2007-08-10 18:23:12 as ** along with 1 person nklee
  • A high-resolution map of transcription in the yeast genome
    PNAS, Vol. 103, No. 14. (4 April 2006), pp. 5320-5325.
    by Lior David, Wolfgang Huber, Marina Granovskaia, Joern Toedling, Curtis J Palm, Lee Bofkin, Ted Jones, Ronald W Davis, Lars M Steinmetz
    posted to yeast noncoding_transcription by dpollard to the group EisenLab on 2007-07-02 22:54:06 as *** along with 7 people and 1 group chasmand tuck alexg eckart_bindewald entropy raiyar xingxu steinmetzlab
  • Binding Site Graphs: A New Graph Theoretical Framework for Prediction of Transcription Factor Binding Sites
    PLoS Computational Biology, Vol. 3, No. 5. (1 May 2007), e90.
    by Timothy E Reddy, Charles Delisi, Boris E Shakhnovich
    posted to yeast venky_presented round_robin motif method eisen_journal_club binding_site ab_initio by dpollard to the group EisenLab on 2007-06-14 23:38:43 as ** along with 5 people aalibes medic0747 GustavoLacerda mircea marti
  • Frequent Gain and Loss of Functional Transcription Factor Binding Sites
    PLoS Computational Biology, Vol. 3, No. 5. (1 May 2007), e99.
    by Scott W Doniger, Justin C Fay
    posted to yeast turnover round_robin rich_presented eisen_journal_club dynamics binding_site by dpollard to the group EisenLab on 2007-06-04 22:33:14 as *** along with 7 people and 1 group emptyhb brant sebastien_vigneau zwang maximilianh cisevol xili03 cis-regulatory-evolution
  • Genetic complexity and quantitative trait loci mapping of yeast morphological traits.
    PLoS Genet, Vol. 3, No. 2. (23 February 2007)
    by S Nogami, Y Ohya, G Yvert
    posted to yeast round_robin qtl morphology in_depth eqtl eisen_journal_club devin_presented by dpollard to the group EisenLab on 2007-03-23 19:26:07 as ***
  • Genetic interactions between polymorphisms that affect gene expression in yeast
    Nature, Vol. 436, No. 7051., pp. 701-703.
    by Rachel B Brem, John D Storey, Jacqueline Whittle, Leonid Kruglyak
    posted to eisen_journal_club eqtl genetic_interactions in_depth qtl yeast by dpollard to the group EisenLab on 2007-03-15 00:52:49 as read along with 3 people and 2 groups mrockman JAShapiro cisevol RockmanLab cis-regulatory-evolution
  • Connectivity in the Yeast Cell Cycle Transcription Network: Inferences from Neural Networks.
    PLoS Comput Biol, Vol. 2, No. 12. (22 December 2006)
    by Christopher E E Hart, Eric Mjolsness, Barbara J J Wold
    posted to yeast transcription network by dpollard to the group EisenLab on 2007-01-19 16:58:55 as ** along with 1 person mhucka
  • A Fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis
    BMC Evolutionary Biology, Vol. 6 (22 November 2006), 99.
    by David A Fitzpatrick, Mary E Logue, Jason E Stajich, Geraldine Butler
    posted to phylogeny yeast by dpollard to the group EisenLab on 2006-12-01 23:41:24 as *** along with 3 people stajich lusk cmzmasek
  • Evolution of alternative transcriptional circuits with identical logic
    Nature, Vol. 443, No. 7110. (2006), pp. 415-420.
    by Annie E Tsong, Brian B Tuch, Hao Li, Alexander D Johnson
    posted to curcuit evolution regulatory yeast by brant to the group EisenLab on 2006-09-28 17:22:41 as *** along with 6 people and 3 groups emptyhb marcius adepace aswin srfairclough cisevol BioinfoCIPF SGU-CIPF cis-regulatory-evolution
  • Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise
    Nature, Vol. 441, No. 7095. (14 May 2006), pp. 840-846.
    by John RS Newman, Sina Ghaemmaghami, Jan Ihmels, David K Breslow, Matthew Noble, Joseph L Derisi, Jonathan S Weissman
    posted to noise yeast by emilyhare to the group EisenLab on 2006-06-23 21:23:58 as ** along with 9 people and 2 groups dylanwalker ajeffs jfr nirfriedman madhadron cmm balabu pau margaritis FAB-lab RNAtransport
  • Flexible promoter architecture requirements for coactivator recruitment
    BMC Molecular Biology, Vol. 7, No. 1. (28 April 2006), 16.
    by Derek Y Chiang, David A Nix, Ryan K Shultzaberger, Audrey P Gasch, Michael B Eisen
    posted to binding expression grammar promoter spacing transcription yeast by dpollard to the group EisenLab on 2006-05-21 05:08:26 as ***** along with 1 person postrational
  • Multiple rounds of speciation associated with reciprocal gene loss in polyploid yeasts
    Nature, Vol. 440, No. 7082., pp. 341-345.
    by Devin R Scannell, Kevin P Byrne, Jonathan L Gordon, Simon Wong, Kenneth H Wolfe
    posted to duplication evolution gene loss rapid speciation yeast by dpollard to the group EisenLab on 2006-04-26 04:40:40 as ** along with 5 people and 1 group cisevol RMGraze cmm echinotrix souravc FAB-lab
  • Functional Partitioning of Yeast Co-Expression Networks after Genome Duplication.
    PLoS Biol, Vol. 4, No. 4. (4 April 2006)
    by Gavin C C Conant, Kenneth H H Wolfe
    posted to duplication evolution gene network yeast by dpollard to the group EisenLab on 2006-04-05 01:43:35 as *** along with 1 person nirfriedman
  • Methods in Yeast Genetics: A Cold Spring Harbor Laboratory Course Manual, 2005 Edition (Cold Spring)
    (01 June 2005)
    by David C Amberg, Daniel J Burke, Jeffrey N Strathern
    posted to genetics lab_library yeast by atsong to the group EisenLab on 2006-03-30 23:39:51 as ****
  • Loss of dispensable genes is not adaptive in yeast.
    Proc Natl Acad Sci U S A, Vol. 102, No. 49. (6 December 2005), pp. 17670-17674.
    by P Sliwa, R Korona
    posted to adaptive environment evolution gene non-essential yeast by dpollard to the group EisenLab on 2006-03-21 20:19:55 as *** along with 2 people aprasad i41m
  • The design of transcription-factor binding sites is affected by combinatorial regulation.
    Genome Biol, Vol. 6, No. 12. (2005)
    by Y Bilu, N Barkai
    posted to binding grammar transcription yeast by dpollard to the group EisenLab on 2006-03-21 20:03:38 as *** along with 7 people chrn tabu samal adepace lewbin nklee xili03
  • Origins of extrinsic variability in eukaryotic gene expression
    Nature (21 December 2005)
    by Dmitri Volfson, Jennifer Marciniak, William J Blake, Natalie Ostroff, Lev S Tsimring, Jeff Hasty
    posted to expression extrinsic gene noise variation yeast by dpollard to the group EisenLab on 2006-03-21 19:48:58 as ** along with 6 people jyuh bayesian balabu timflutre margaritis cjeans
  • Genome-wide scan reveals that genetic variation for transcriptional plasticity in yeast is biased towards multi-copy and dispensable genes.
    Gene, Vol. 366, No. 2. (1 February 2006), pp. 343-351.
    by CR Landry, J Oh, DL Hartl, D Cavalieri
    posted to gene genetic multi-copy non-essential placticity transcription variation yeast by dpollard to the group EisenLab on 2006-03-21 19:21:02 as *** along with 2 people caseybrown aubinhon
  • Genome Biology | Full text | The design of transcription-factor binding sites is affected by combinatorial regulation
    posted to binding cis-regulation computational constraint factor transcription yeast by indigoviolet to the group EisenLab on 2005-12-06 03:51:51 as ***
  • Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae
    Genes Dev., Vol. 19, No. 22. (15 November 2005), pp. 2695-2704.
    by Joseph A Martens, Pei-Yun J Wu, Fred Winston
    posted to cis-regulation enhancer geneexpression intergenic transcription yeast by indigoviolet to the group EisenLab on 2005-11-16 22:58:58 as ** along with 1 person dpollard
    • Puoi citare questa pagina come: http://www.citeulike.org/group/652/tag/yeast

    RIS BibTeX RSS
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.