Registrati | Log in | FAQ      [?] 
Recent | Recommended | Search | Authors | Tags | Export

Group: SGU-CIPF - library [622 articles]

Recent papers posted by members of the SGU-CIPF group
  • Recent acceleration of human adaptive evolution
    Proceedings of the National Academy of Sciences, Vol. 104, No. 52. (December 2007), pp. 20753-20758.
    by John Hawks, Eric T Wang, Gregory M Cochran, Henry C Harpending, Robert K Moyzis
    posted to evolution human positive selection by marcius to the group SGU-CIPF on 2008-02-06 09:19:00 as **
  • Automated de novo prediction of native-like RNA tertiary structures
    PNAS (28 August 2007), 0703836104.
    by Rhiju Das, David Baker
    posted to structure_prediction rna ab-initio by marcius to the group SGU-CIPF on 2007-09-01 10:46:02 as ** along with 6 people and 1 group reyez jwm eckart_bindewald zwang physics Ema BioinfoCIPF
  • RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription
    Science (17 May 2007), 1138341.
    by Philipp Kapranov, Jill Cheng, Sujit Dike, David A Nix, Radharani Duttagupta, Aarron T Willingham, Peter F Stadler, Jana Hertel, Joerg Hackermueller, Ivo L Hofacker, Ian Bell, Evelyn Cheung, Jorg Drenkow, Erica Dumais, Sandeep Patel, Gregg Helt, Madhavan Ganesh, Srinka Ghosh, Antonio Piccolboni, Victor Sementchenko, Hari Tammana, Thomas R Gingeras
    posted to ncrna genome classification by marcius to the group SGU-CIPF on 2007-06-15 11:16:53 as ** along with 11 people and 3 groups xingxu alexg dpollard xico mtagaya rdiaz djkt stajich mathijsv asddd elfar EisenLab WetBiology BioinfoCIPF
  • RNA structure: experimental analysis.
    Curr Opin Microbiol (24 May 2007)
    by Brice Felden
    posted to structure rna review experimental by marcius to the group SGU-CIPF on 2007-06-12 12:56:46 as ** along with 3 people and 1 group penka emidio_capriotti debatebob BioinfoCIPF
  • RNA conformational classes.
    Nucleic Acids Res, Vol. 32, No. 5. (2004), pp. 1666-1677.
    by B Schneider, Z Morávek, HM Berman
    posted to rotamers rna classification biophysics by marcius to the group SGU-CIPF on 2007-06-12 12:55:21 as ** along with 1 person and 1 group emidio_capriotti BioinfoCIPF
  • Evolutionary rates vary among rRNA structural elements
    Nucl. Acids Res., Vol. 35, No. 10. (11 May 2007), pp. 3339-3354.
    by S Smit, J Widmann, R Knight
    posted to rna evolution by marcius to the group SGU-CIPF on 2007-06-12 12:54:21 as ** along with 5 people and 2 groups eckart_bindewald balicea penka i000 cjeans BioinfoCIPF YY1
  • RNAbor: a web server for RNA structural neighbors.
    Nucleic Acids Res (25 May 2007)
    by Eva Freyhult, Vincent Moulton, Peter Clote
    posted to server sequence-structure secondary_structure rna by marcius to the group SGU-CIPF on 2007-06-04 10:14:23 as ** along with 2 people and 1 group evaf sebastien_vigneau BioinfoCIPF
  • The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods.
    Nucleic Acids Res (25 May 2007)
    by Sebastien Moretti, Fabrice Armougom, Iain M M Wallace, Desmond G G Higgins, Cornelius V V Jongeneel, Cedric Notredame
    posted to sequence_alignment sequence alignment algorithms by marcius to the group SGU-CIPF on 2007-06-04 10:12:59 as ** along with 2 people and 1 group sebastien_vigneau marti BioinfoCIPF
  • RNA Sampler: A new sampling based algorithm for common RNA secondary structure prediction and structural alignment.
    Bioinformatics (30 May 2007)
    by Xing Xu, Yongmei Ji, Gary D D Stormo
    posted to structure_alignment rna by marcius to the group SGU-CIPF on 2007-06-04 10:11:38 as ** along with 1 person and 2 groups cjeans Bioinformatics BioinfoCIPF
  • On the relationship between sequence and structure similarities in proteomics
    Bioinformatics, Vol. 23, No. 6. (15 March 2007), pp. 717-723.
    by K Evgeny
    posted to sequence-structure classification bioinformatics by marcius to the group SGU-CIPF on 2007-04-12 10:48:28 as ** along with 1 person and 1 group penka BioinfoCIPF
  • Deleterious SNP prediction: be mindful of your training data!
    Bioinformatics, Vol. 23, No. 6. (15 March 2007), pp. 664-672.
    by Care, A Matthew, Needham, J Chris, Bulpitt, J Andrew, Westhead, R David
    posted to snp bioinformatics by marcius to the group SGU-CIPF on 2007-04-12 10:45:50 as ** along with 3 people and 1 group happy_manatee penka Yumyai BioinfoCIPF
  • Multiple structural alignment and clustering of RNA sequences.
    Bioinformatics (25 February 2007)
    by Elfar Torarinsson, Jakob H H Havgaard, Jan Gorodkin
    posted to clustering rna secondary_structure structure_alignment by marcius to the group SGU-CIPF on 2007-03-01 12:29:48 as ** along with 7 people and 1 group eckart_bindewald eweaver ppgardne ilh zwang dunnp zhouyu BioinfoCIPF
  • Key biology databases go wiki
    Nature, Vol. 445, No. 7129. (14 February 2007), pp. 691-691.
    by Jim Giles
    posted to opensourcebiology web20 by marcius to the group SGU-CIPF on 2007-02-15 17:39:08 as ** along with 9 people and 5 groups jyuh eweaver kehan raiyar grahamc leechuck PunkRock barriot mircea biodiversity_conservation Bioinformatics BioinfoCIPF steinmetzlab GrassBase
  • Modeling the Evolution of Protein Domain Architectures Using Maximum Parsimony
    Journal of Molecular Biology, Vol. 366, No. 1. (9 February 2007), pp. 307-315.
    by Jessica H Fong, Lewis Y Geer, Anna R Panchenko, Stephen H Bryant
    posted to protein_domains evolution bioinformatics algorithms by marcius to the group SGU-CIPF on 2007-01-25 08:31:09 as ** along with 5 people and 2 groups icases tny choonpeng redelings zwang BioinfoCIPF TNT
  • Structural proteomics: from the molecule to the system
    Nature Structural & Molecular Biology, Vol. 14, No. 1., pp. 3-4.
    by Lucia Banci, Wolfgang Baumeister, Josefina Enfedaque, Udo Heinemann, Gunter Schneider, Israel Silman, Joel L Sussman
    posted to meeting proteomics review structural_genomics structure views by marcius to the group SGU-CIPF on 2007-01-09 09:39:59 as ** along with 1 person and 1 group gerry BioinfoCIPF
  • A combinatorial approach to create artificial homing endonucleases cleaving chosen sequences
    Nucleic Acids Research, Vol. 34, No. 22. (December 2006), pp. e149-e149.
    by J Smith, S Grizot, S Arnould, A Duclert, J Epinat, P Chames, J Prieto, P Redondo, F Blanco, J Bravo, G Montoya, F Paques, P Duchateau
    posted to bioengineering protein_design by marcius to the group SGU-CIPF on 2007-01-03 13:03:20 as ** along with 1 group BioinfoCIPF
  • Sequence comparison by sequence harmony identifies subtype-specific functional sites
    Nucleic Acids Research, Vol. 34, No. 22. (December 2006), pp. 6540-6548.
    by W Pirovano, KA Feenstra, J Heringa
    posted to bioinformatics classification function protein sequence_alignment by marcius to the group SGU-CIPF on 2007-01-03 13:02:03 as ** along with 2 people and 1 group sriram_s marti BioinfoCIPF
  • The interaction networks of structured RNAs
    Nucleic Acids Research, Vol. 34, No. 22. (December 2006), pp. 6587-6604.
    by A Lescoute, E Westhof
    posted to interaction rna secondary_structure by marcius to the group SGU-CIPF on 2007-01-03 13:00:44 as ** along with 6 people and 1 group austin reyez jennifermbui jarasch debatebob ankur_iitg BioinfoCIPF
  • RNAs everywhere: genome-wide annotation of structured RNAs.
    J Exp Zoolog B Mol Dev Evol (14 December 2006)
    by Rolf Backofen, Stephan H H Bernhart, Christoph Flamm, Claudia Fried, Guido Fritzsch, Jörg Hackermüller, Jana Hertel, Ivo L L Hofacker, Kristin Missal, Axel Mosig, Sonja J J Prohaska, Dominic Rose, Peter F F Stadler, Andrea Tanzer, Stefan Washietl, Sebastian Will
    posted to classification review rna by marcius to the group SGU-CIPF on 2007-01-03 12:59:57 as ** along with 11 people and 4 groups jfr bala eckart_bindewald tardigrade andersbj penka cdawson ilh raylim jayster4 maralena microRNA BioinfoCIPF DictyosteliumGroup GIG
  • Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation
    Bioinformatics, Vol. 23, No. 1. (1 January 2007), pp. 127-128.
    by Letunic, P Bork
    posted to phylogeny server software by marcius to the group SGU-CIPF on 2007-01-03 12:55:33 as ** along with 4 people and 1 group jyuh skhadar hpaces gjuggler BioinfoCIPF
  • SCOR: a Structural Classification of RNA database.
    Nucleic Acids Res, Vol. 30, No. 1. (1 January 2002), pp. 392-394.
    by PS Klosterman, M Tamura, SR Holbrook, SE Brenner
    posted to databases rna structure by marcius to the group SGU-CIPF on 2006-12-21 14:21:00 as ** along with 1 person and 1 group debatebob BioinfoCIPF
  • RNA structure: the long and the short of it.
    Curr Opin Struct Biol, Vol. 15, No. 3. (June 2005), pp. 302-308.
    by SR Holbrook
    posted to review rna structure by marcius to the group SGU-CIPF on 2006-11-29 12:55:28 as ** along with 2 people and 1 group eckart_bindewald debatebob BioinfoCIPF
  • Discovering disease-genes by topological features in human protein-protein interaction network
    Bioinformatics, Vol. 22, No. 22. (15 November 2006), pp. 2800-2805.
    by J Xu, Y Li
    posted to bioinformatics disease protein_interactions by marcius to the group SGU-CIPF on 2006-11-24 08:57:33 as ** along with 2 people and 1 group skhadar ealloza BioinfoCIPF
  • Synthetic biology--putting engineering into biology
    Bioinformatics, Vol. 22, No. 22. (15 November 2006), pp. 2790-2799.
    by Matthias Heinemann, Sven Panke
    posted to biology review synthetic_biology by marcius to the group SGU-CIPF on 2006-11-24 08:21:40 as ** along with 5 people and 1 group aalibes jtaylor Freecat fishtank karfunkel BioinfoCIPF
  • TimeTree: a public knowledge-base of divergence times among organisms
    Bioinformatics, Vol. 22, No. 23. (1 December 2006), pp. 2971-2972.
    by Hedges, S Blair, Dudley, Joel, Kumar, Sudhir
    posted to phylogeny by marcius to the group SGU-CIPF on 2006-11-23 14:51:07 as ** along with 1 group BioinfoCIPF
  • A protein interaction network for pluripotency of embryonic stem cells
    Nature
    by Jianlong Wang, Sridhar Rao, Jianlin Chu, Xiaohua Shen, Dana N Levasseur, Thorold W Theunissen, Stuart H Orkin
    posted to protein_interactions stem_cells systems_biology by marcius to the group SGU-CIPF on 2006-11-23 11:04:53 as ** along with 6 people and 1 group kentsis wnpx yeastyboy Ao_Li2007 iris_2001 tdmckee BioinfoCIPF
  • Variability and memory of protein levels in human cells
    Nature (19 November 2006)
    by Alex Sigal, Ron Milo, Ariel Cohen, Naama Geva-Zatorsky, Yael Klein, Yuvalal Liron, Nitzan Rosenfeld, Tamar Danon, Natalie Perzov, Uri Alon
    posted to classification protein systems_biology by marcius to the group SGU-CIPF on 2006-11-23 11:02:59 as ** along with 4 people and 2 groups icases jjray margaritis cjeans BioinfoCIPF TNT
  • An RNA folding algorithm including pseudoknots based on dynamic weighted matching.
    Comput Biol Chem, Vol. 30, No. 1. (February 2006), pp. 72-76.
    by H Liu, D Xu, J Shao, Y Wang
    posted to algorithms rna secondary_structure by marcius to the group SGU-CIPF on 2006-11-16 17:44:25 as ** along with 1 person and 1 group eckart_bindewald BioinfoCIPF
  • ProteinRNA interactions: exploring binding patterns with a three-dimensional superposition analysis of high resolution structures
    Bioinformatics, Vol. 22, No. 22. (15 November 2006), pp. 2746-2752.
    by N Morozova, J Allers, Y Shamoo
    posted to bioinformatics protein_interactions rna algorithms by marcius to the group SGU-CIPF on 2006-11-16 09:29:09 as ** along with 1 group BioinfoCIPF
  • Mining frequent stem patterns from unaligned RNA sequences.
    Bioinformatics (14 August 2006)
    by Michiaki Hamada, Koji Tsuda, Taku Kudo, Taishin Kin, Kiyoshi Asai
    posted to bioinformatics rna secondary_structure by marcius to the group SGU-CIPF on 2006-11-01 14:13:15 as ** along with 5 people and 2 groups tardigrade andersbj samal dquest plofje microRNA BioinfoCIPF
  • Spatial localization of ligand binding sites from electron current density surfaces calculated from NMR chemical shift perturbations.
    J Am Chem Soc, Vol. 124, No. 39. (2 October 2002), pp. 11758-11763.
    by MA McCoy, DF Wyss
    posted to experimental nmr protein_complexes protein_interactions by marcius to the group SGU-CIPF on 2006-10-30 10:40:13 as ** along with 1 group BioinfoCIPF
  • Three-dimensional comparative modeling of RNA.
    Nucleic Acids Symp Ser, No. 36. (1997), pp. 69-71.
    by C Zwieb, F Müller
    posted to algorithms bioinformatics comparative_modeling rna by marcius to the group SGU-CIPF on 2006-10-27 21:31:25 as ** along with 1 group BioinfoCIPF
  • From The Cover: Global mapping of the protein structure space and application in structure-based inference of protein function
    PNAS, Vol. 102, No. 10. (8 March 2005), pp. 3651-3656.
    by Jingtong Hou, Se-Ran Jun, Chao Zhang, Sung-Hou Kim
    posted to algorithms bioinformatics clustering protein_structure by marcius to the group SGU-CIPF on 2006-10-26 08:42:48 as ** along with 1 person and 1 group tny BioinfoCIPF
  • Homology modeling using parametric alignment ensemble generation with consensus and energy-based model selection
    Nucleic Acids Research, Vol. 34, No. 17. (October 2006), pp. e112-e112.
    by D Chivian, D Baker
    posted to algorithms bioinformatics comparative_modeling sequence_alignment by marcius to the group SGU-CIPF on 2006-10-25 21:43:08 as ** along with 1 person and 1 group j3xucite BioinfoCIPF
  • RNA structures and folding: from conventional to new issues in structure predictions.
    Curr Opin Struct Biol, Vol. 7, No. 2. (April 1997), pp. 229-235.
    by P Schuster, PF Stadler, A Renner
    posted to prediction review rna structure by marcius to the group SGU-CIPF on 2006-10-23 17:16:19 as ** along with 1 person and 1 group emidio_capriotti BioinfoCIPF
  • Protein–Protein Interactions More Conserved within Species than across Species
    PLoS Computational Biology, Vol. 2, No. 7. (1 July 2006), e79.
    by Sven Mika, Burkhard Rost
    posted to algorithms evolution protein_domains protein_interactions by marcius to the group SGU-CIPF on 2006-10-22 12:13:05 as ** along with 3 people and 1 group chad_davis skhadar dquest BioinfoCIPF
  • Structural Modeling of Protein Interactions by Analogy: Application to PSD-95
    PLoS Computational Biology, Vol. preprint, No. 2006. (1 October 2006)
    by Dmitry Korkin, Fred P Davis, Frank Alber, Tinh Luong, Min-Yi Shen, Vladan Lucic, Mary B Kennedy, Andrej Sali
    posted to algorithms comparative_docking comparative_modeling protein_domains protein_interactions by marcius to the group SGU-CIPF on 2006-10-22 12:12:40 as ** along with 1 person and 1 group bicko BioinfoCIPF
  • The Many Faces of Protein–Protein Interactions: A Compendium of Interface Geometry
    PLoS Computational Biology, Vol. 2, No. 9. (1 September 2006), e124.
    by Wan K Kim, Andreas Henschel, Christof Winter, Michael Schroeder
    posted to algorithms databases protein_domains protein_interactions by marcius to the group SGU-CIPF on 2006-10-22 12:12:00 as ** along with 7 people and 1 group marck allmensch wilbur bicko chad_davis choonpeng Evangelia BioinfoCIPF
  • Localization of protein-binding sites within families of proteins.
    Protein Sci, Vol. 14, No. 9. (September 2005), pp. 2350-2360.
    by D Korkin, FP Davis, A Sali
    posted to bioinformatics comparative_docking protein_interactions by marcius to the group SGU-CIPF on 2006-10-22 12:11:09 as ** along with 5 people and 3 groups wilbur barry tjimenez bicko chad_davis structural_bioinformatics Bioinformatics BioinfoCIPF
  • NMR spectroscopy of RNA.
    Chembiochem, Vol. 4, No. 10. (6 October 2003), pp. 936-962.
    by B Fürtig, C Richter, J Wöhnert, H Schwalbe
    posted to nmr review rna by marcius to the group SGU-CIPF on 2006-10-22 12:10:22 as ** along with 1 group BioinfoCIPF
  • Mapping protein-protein interactions in solution by NMR spectroscopy.
    Biochemistry, Vol. 41, No. 1. (8 January 2002), pp. 1-7.
    by ER Zuiderweg
    posted to nmr protein_interactions review by marcius to the group SGU-CIPF on 2006-10-22 12:09:51 as ** along with 1 person and 1 group dgruiz BioinfoCIPF
  • Use of 19F NMR spectroscopy to screen chemical libraries for ligands that bind to proteins.
    Org Biomol Chem, Vol. 2, No. 5. (7 March 2004), pp. 725-731.
    by T Tengel, T Fex, H Emtenas, F Almqvist, I Sethson, J Kihlberg
    posted to ligand nmr protein_interactions by marcius to the group SGU-CIPF on 2006-10-22 12:09:26 as ** along with 1 group BioinfoCIPF
  • A multi-model approach to nucleic acid-based drug development.
    BioDrugs, Vol. 18, No. 1. (2004), pp. 37-50.
    by I Gautherot, R Sodoyer
    posted to discovery drug nmr rna by marcius to the group SGU-CIPF on 2006-10-22 12:09:02 as ** along with 1 group BioinfoCIPF
  • Studies of protein-ligand interactions by NMR.
    Biochem Soc Trans, Vol. 31, No. Pt 5. (October 2003), pp. 1006-1009.
    by J Clarkson, ID Campbell
    posted to nmr protein_interactions by marcius to the group SGU-CIPF on 2006-10-22 12:08:27 as ** along with 1 group BioinfoCIPF
  • Protein-protein interaction analysis by nuclear magnetic resonance spectroscopy.
    Methods Mol Biol, Vol. 261 (2004), pp. 79-92.
    by G Gao, JG Williams, SL Campbell
    posted to nmr protein_interactions by marcius to the group SGU-CIPF on 2006-10-22 12:08:07 as ** along with 1 group BioinfoCIPF
  • 1H MR spectroscopy of the brain: absolute quantification of metabolites.
    Radiology, Vol. 240, No. 2. (August 2006), pp. 318-332.
    by JF Jansen, WH Backes, K Nicolay, ME Kooi
    posted to metabolomics nmr by marcius to the group SGU-CIPF on 2006-10-22 12:07:24 as ** along with 1 group BioinfoCIPF
  • Virtual drug discovery and development for neglected diseases through public-private partnerships.
    Nat Rev Drug Discov, Vol. 2, No. 11. (November 2003), pp. 919-928.
    by S Nwaka, RG Ridley
    posted to discovery disease drug review views by marcius to the group SGU-CIPF on 2006-10-21 15:23:40 as ** along with 1 group BioinfoCIPF
  • Antimalarial drug discovery: efficacy models for compound screening.
    Nat Rev Drug Discov, Vol. 3, No. 6. (June 2004), pp. 509-520.
    by DA Fidock, PJ Rosenthal, SL Croft, R Brun, S Nwaka
    posted to discovery disease drug review views by marcius to the group SGU-CIPF on 2006-10-21 15:22:59 as ** along with 1 group BioinfoCIPF
  • Drug discovery and beyond: the role of public-private partnerships in improving access to new malaria medicines
    Transactions of the Royal Society of Tropical Medicine and Hygiene, Vol. 99, No. Supplement 1. (2005), pp. 20-29.
    by Solomon Nwaka
    posted to discovery disease drug review views by marcius to the group SGU-CIPF on 2006-10-21 15:22:06 as ** along with 1 person and 1 group cmmorel BioinfoCIPF
  • Evaluation of library ranking efficacy in virtual screening.
    J Comput Chem, Vol. 26, No. 1. (15 January 2005), pp. 11-22.
    by M Kontoyianni, GS Sokol, LM McClellan
    posted to algorithms docking drug ligand protein by marcius to the group SGU-CIPF on 2006-10-21 14:25:23 as ** along with 3 people and 1 group BragilMassoud nachtalp schuwi BioinfoCIPF
    • Puoi citare questa pagina come: http://www.citeulike.org/group/1570

    Result page: 1 2 3 4 5 6 7 8 9 10 Next RIS BibTeX RSS
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.